Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30e09
         (577 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in IAP...   149   5e-35
UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in IAP2...   124   2e-27
UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5; ...    62   1e-08
UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16; Nucleopolyhedro...    48   1e-04
UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineat...    41   0.024
UniRef50_Q80LN7 Cluster: Putative uncharacterized protein; n=1; ...    40   0.042
UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -...    37   0.39 
UniRef50_Q7T9S2 Cluster: ORF_93; n=7; Granulovirus|Rep: ORF_93 -...    33   3.6  

>UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in
           IAP2-VLF1 intergenic region; n=7;
           Nucleopolyhedrovirus|Rep: Uncharacterized 15.5 kDa
           protein in IAP2-VLF1 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 133

 Score =  149 bits (361), Expect = 5e-35
 Identities = 73/96 (76%), Positives = 77/96 (80%)
 Frame = +2

Query: 290 MSNLMKNFFTEXXXXXXXXXXXXXXXXXXXDWLCEQVYPDKDFSLKLKRVINMFLNDEIE 469
           MSNLMKNFFTE                   +WLCEQVYPDKDFSLKLKRV+NMFLN+EIE
Sbjct: 1   MSNLMKNFFTELVKSTTFTTKVSVVKTTLSNWLCEQVYPDKDFSLKLKRVVNMFLNNEIE 60

Query: 470 NDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVT 577
           N+KIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVT
Sbjct: 61  NNKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVT 96


>UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in
           IAP2-VLF1 intergenic region; n=12;
           Nucleopolyhedrovirus|Rep: Uncharacterized 9.4 kDa
           protein in IAP2-VLF1 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 84

 Score =  124 bits (298), Expect = 2e-27
 Identities = 67/85 (78%), Positives = 67/85 (78%)
 Frame = +2

Query: 14  MNLYLLLGALTIFSLVYDKKENSXXXXXXXXXXXXXXXXSPAIISKNTESNVEDIPSHKA 193
           MNLYLLLGAL IFSLVYDKKENS                SPAIISKNTES VEDIPSHKA
Sbjct: 1   MNLYLLLGALAIFSLVYDKKENSIFLYLLILFLVFIIV-SPAIISKNTESTVEDIPSHKA 59

Query: 194 KSVRKKLEIEQALDAILNKNTSSID 268
           KSVRKKLEIEQALDAILNKNTSSID
Sbjct: 60  KSVRKKLEIEQALDAILNKNTSSID 84


>UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5;
           Nucleopolyhedrovirus|Rep: Uncharacterized 14.9 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 130

 Score = 61.7 bits (143), Expect = 1e-08
 Identities = 26/62 (41%), Positives = 41/62 (66%)
 Frame = +2

Query: 380 DWLCEQVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALL 559
           DWL  QVYPD+ FS K + V+ MF++ +++ + +Y LV T+D S  L+  Q+++L  A  
Sbjct: 31  DWLNSQVYPDERFSAKWRGVLKMFVDGQLDEESVYCLVNTIDPSKLLTVGQINYLARAFR 90

Query: 560 NN 565
           NN
Sbjct: 91  NN 92


>UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16;
           Nucleopolyhedrovirus|Rep: LdOrf-85 peptide - Lymantria
           dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
          Length = 86

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +2

Query: 149 KNTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 268
           K   S+  D+ + KAKS++KK ++E+A DAILNKNTSS D
Sbjct: 47  KPESSDAADLQTGKAKSIKKKRDLERAFDAILNKNTSSTD 86


>UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineata
           nucleopolyhedrosis virus|Rep: Ac75-like protein - Clanis
           bilineata nucleopolyhedrosis virus
          Length = 130

 Score = 40.7 bits (91), Expect = 0.024
 Identities = 20/56 (35%), Positives = 32/56 (57%)
 Frame = +2

Query: 407 DKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSV 574
           DK F  K  +V+ MF+  +I  + +  ++  VDS NKL+  Q+DFL   + +N  V
Sbjct: 38  DKRFCDKFVKVLKMFIASQITIEDMCNIMAAVDSPNKLTADQIDFLCQQVQHNHEV 93


>UniRef50_Q80LN7 Cluster: Putative uncharacterized protein; n=1;
           Adoxophyes honmai NPV|Rep: Putative uncharacterized
           protein - Adoxophyes honmai nucleopolyhedrovirus
          Length = 129

 Score = 39.9 bits (89), Expect = 0.042
 Identities = 18/53 (33%), Positives = 36/53 (67%)
 Frame = +2

Query: 416 FSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSV 574
           F++KL +++N+FL ++IE + +  L+ + D  N L+  QV++L +  +NN +V
Sbjct: 41  FTVKLVKIVNLFLQEKIEVEDLQHLLNSTDGLN-LTINQVNYLYYQAVNNNNV 92


>UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -
           Xestia c-nigrum granulosis virus (XnGV) (Xestia
           c-nigrumgranulovirus)
          Length = 85

 Score = 36.7 bits (81), Expect = 0.39
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 152 NTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 268
           NT+S   D+ + + K  +KK       DAILNKN SS++
Sbjct: 47  NTDSAPHDLYNEETKKAKKKKHFNDMFDAILNKNNSSLE 85


>UniRef50_Q7T9S2 Cluster: ORF_93; n=7; Granulovirus|Rep: ORF_93 -
           Adoxophyes orana granulovirus (AoGV)
          Length = 154

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 425 KLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSV 574
           KL ++  MFLNDE++   +Y+L        KL+  Q D+L     N+  +
Sbjct: 51  KLNKIFKMFLNDELDQSMMYQL---FGDKLKLNHSQFDYLYQRTKNDAQI 97


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,241,140
Number of Sequences: 1657284
Number of extensions: 8189473
Number of successful extensions: 22014
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22009
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)