Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30e06
         (524 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   3.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/27 (25%), Positives = 19/27 (70%)
 Frame = +1

Query: 97  LSEDRTRILFEKLTKYIGVNVKLLIDR 177
           L E + + + +K +++IG  +KL++++
Sbjct: 191 LEEHKIKEIVKKHSQFIGYPIKLVVEK 217


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/32 (21%), Positives = 16/32 (50%)
 Frame = +1

Query: 187 TYCFREKKDRVYYISEKLLHLAQTVKPDNLVS 282
           TYCFR     +  ++ +L+     ++  ++ S
Sbjct: 187 TYCFRNDNSEILKMATQLVDFKSVIRSISVFS 218


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 242 SSFSDM*YTLSFFSLKQYV 186
           + F  + YTL F  LKQYV
Sbjct: 346 AGFFPINYTLVFSVLKQYV 364


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 134 SFSNNILVRSSDNT 93
           +F+NN+LV  S N+
Sbjct: 104 NFTNNVLVHRSQNS 117


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 24  MFLVTLNSRVFIFREYNKII 83
           + +VT++  VF F  +NK++
Sbjct: 111 VMVVTVDLHVFFFTLFNKLL 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,478
Number of Sequences: 336
Number of extensions: 2767
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)