Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30e04
         (432 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CFFAD Cluster: hypothetical protein TTHERM_0072...    34   1.1  
UniRef50_A0E238 Cluster: Chromosome undetermined scaffold_74, wh...    33   1.9  
UniRef50_A7TF31 Cluster: Putative uncharacterized protein; n=1; ...    32   5.9  
UniRef50_A2R4N3 Cluster: Contig An15c0070, complete genome; n=4;...    31   7.8  

>UniRef50_UPI00006CFFAD Cluster: hypothetical protein
           TTHERM_00723470; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00723470 - Tetrahymena
           thermophila SB210
          Length = 183

 Score = 34.3 bits (75), Expect = 1.1
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
 Frame = +2

Query: 212 PNK--DNIRTPTTEVKPSINPVLQVVTAKSTMVPIKVVP-KVSISCYFSLSEAIQ 367
           PNK  + ++ PT E  P+I  +L ++ A+  + PIK    K S+S  FSL+  +Q
Sbjct: 4   PNKIQEYVKGPTLEACPNIIALLYIIQAEQLVNPIKKTKIKFSVSYIFSLNSPLQ 58


>UniRef50_A0E238 Cluster: Chromosome undetermined scaffold_74, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_74,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 624

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 190 NASNVNNAE*R*YPYTN-N*G*TFNQSSATSSNS*KYNGTNQSCT*GQ 330
           N+SN  N     YPY+N      +  +S +SSNS  YN TNQ+ T  Q
Sbjct: 121 NSSNTTNGSNGSYPYSNLTYSYDYPSTSNSSSNSSSYNTTNQTSTINQ 168


>UniRef50_A7TF31 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 2016

 Score = 31.9 bits (69), Expect = 5.9
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +3

Query: 33  SDKFAEDKTAFLKLMHNVFSKIFNIL*EVKICYLSHDIDLLSFKALN 173
           SD F   ++ F+KL  NVFS I+N   +  + ++S  I++  F  +N
Sbjct: 222 SDIFTTFQSKFVKLSKNVFSDIYNDKQDFPVNFISTIIEIWKFNFIN 268


>UniRef50_A2R4N3 Cluster: Contig An15c0070, complete genome; n=4;
           Eurotiomycetidae|Rep: Contig An15c0070, complete genome
           - Aspergillus niger
          Length = 282

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
 Frame = +2

Query: 194 PPMSTMPNKDNIRTPTTEVKPS----INPVLQVVTAKSTMVPIKVVPKVSISCYFSLSEA 361
           PP  TM    +   P+ EVKP+    IN  LQ++   S  + + V+P+  I  + SL EA
Sbjct: 220 PPPKTMARYWDFSLPSAEVKPTTVSKINTALQLLLVGSA-IALPVLPETIIDAW-SLREA 277

Query: 362 IQG 370
           + G
Sbjct: 278 MTG 280


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 347,205,262
Number of Sequences: 1657284
Number of extensions: 5839657
Number of successful extensions: 14294
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14286
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)