Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30e02
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   1.8  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   2.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   4.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   4.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   9.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   9.5  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -2

Query: 265 PQKRFIFGMIVFVLSNAFGRFIRNNRHFTNTFRHN 161
           P+KR     I   +   F  +  N + + N+ RHN
Sbjct: 100 PEKRLTLNGIYEYIMRNFPYYRENKQGWQNSIRHN 134


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 317 RIAFLNIDNNQFLPSCKTPKKI 252
           R  F  ++N+QFL + K  KK+
Sbjct: 126 RAKFEELNNDQFLKTLKPVKKV 147


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 379 HHVGHSVHG*NKIV 338
           HH GH +H  + +V
Sbjct: 324 HHAGHHIHAQHHVV 337


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -2

Query: 265 PQKRFIFGMIVFVLSNAFGRFIRNNRHFTNTFRHN 161
           PQK      I   + + F  + +N + + N+ RH+
Sbjct: 157 PQKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHS 191


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 337 QRFYFNRVQNG 369
           ++FYF R +NG
Sbjct: 370 RKFYFKRARNG 380


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 71  ILICIYFQFY 100
           IL+CIY+ +Y
Sbjct: 234 ILLCIYYFYY 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,834
Number of Sequences: 336
Number of extensions: 2597
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)