Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30e02
(455 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92786-4|CAB07206.1| 553|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF039052-12|AAF98633.1| 391|Caenorhabditis elegans Hypothetical... 28 3.7
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 28 3.7
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z50005-1|CAA90294.1| 334|Caenorhabditis elegans Hypothetical pr... 27 4.9
U00031-12|AAX88837.1| 100|Caenorhabditis elegans Hypothetical p... 27 6.5
U00031-10|AAK18872.2| 460|Caenorhabditis elegans Hypothetical p... 27 6.5
U61945-2|AAB03125.2| 494|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z92786-4|CAB07206.1| 553|Caenorhabditis elegans Hypothetical
protein F47H4.7 protein.
Length = 553
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 116 NLELRPSS*SDYCTLIMSKRVREMSVVSDETAKRIRQNEHYHAKNESFLGFCNLEEI 286
NLEL P S ++ IM VRE+ + ++A + +H K++ F + L+E+
Sbjct: 117 NLELEPRSLAEMHNDIMKNIVREL---NSQSANSPGPSARHHDKDDDFPAYNQLKEL 170
>Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical
protein C07A9.8 protein.
Length = 453
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 320 ERIAFLNIDNNQFLPSCKTPKKIHFWHDSVR 228
E I++L + N+ + + K P K+ W SVR
Sbjct: 407 EEISYLKKEENKMIAAGKKPNKLKLWVKSVR 437
>AF039052-12|AAF98633.1| 391|Caenorhabditis elegans Hypothetical
protein T22D1.12 protein.
Length = 391
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 234 TIMPKMNLFWGFATWKKLIIINV*KCNTF 320
T+ +NLFW F W + V NTF
Sbjct: 92 TLYTSLNLFWPFGDWSCKFLAGVQAVNTF 120
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 180 VKCRLFRMKRPNAFDKTNTIMPKMNLFWGFATWKKLIIINV 302
++C+ R N FD+ TIMP+ FW ++ + +I N+
Sbjct: 131 MRCKQINHAR-NVFDRAITIMPRAMQFWLKYSYMEEVIENI 170
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 378 TTLAILYTVKIKSLSKFWSRTYCIFK 301
T + + T+KI+ K W+R YC+ K
Sbjct: 38 TVVVMADTLKIRGALKRWNRYYCVLK 63
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 378 TTLAILYTVKIKSLSKFWSRTYCIFK 301
T + + T+KI+ K W+R YC+ K
Sbjct: 38 TVVVMADTLKIRGALKRWNRYYCVLK 63
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 378 TTLAILYTVKIKSLSKFWSRTYCIFK 301
T + + T+KI+ K W+R YC+ K
Sbjct: 75 TVVVMADTLKIRGALKRWNRYYCVLK 100
>Z50005-1|CAA90294.1| 334|Caenorhabditis elegans Hypothetical
protein F16H9.2 protein.
Length = 334
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -3
Query: 234 CSFCRMRLAVSSETTDISR-TRLDIISVQ*SLYDDGRSSRF 115
C FCR+ V D+SR T L+ + + S +D R + F
Sbjct: 63 CKFCRLHKCVQKGMLDLSRYTHLERLICELSEFDSKRETLF 103
>U00031-12|AAX88837.1| 100|Caenorhabditis elegans Hypothetical
protein B0361.2b protein.
Length = 100
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 259 KRFIFGMIVFVLSNAFGRFIRNNRHFTNTF 170
K F + + F LSN F I ++ HF +TF
Sbjct: 18 KGFSYFAVDFGLSNGFAHVIESHDHFPSTF 47
>U00031-10|AAK18872.2| 460|Caenorhabditis elegans Hypothetical
protein B0361.2a protein.
Length = 460
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 259 KRFIFGMIVFVLSNAFGRFIRNNRHFTNTF 170
K F + + F LSN F I ++ HF +TF
Sbjct: 378 KGFSYFAVDFGLSNGFAHVIESHDHFPSTF 407
>U61945-2|AAB03125.2| 494|Caenorhabditis elegans Hypothetical
protein C49C8.4 protein.
Length = 494
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = -1
Query: 158 VCNNRFTMTDVVQDFNELYDKIENKYKLKYTF 63
+ N + MT+ V+ ++Y+K+++KY +TF
Sbjct: 34 IIGNLYLMTEDVKPGYKMYEKLKDKYGPVFTF 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,732,085
Number of Sequences: 27780
Number of extensions: 229197
Number of successful extensions: 582
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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