Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30e01
         (224 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24DM3 Cluster: Putative uncharacterized protein; n=1; ...    33   1.6  
UniRef50_A4XI83 Cluster: Coproporphyrinogen dehydrogenase; n=1; ...    31   6.6  
UniRef50_Q7RYE2 Cluster: Predicted protein; n=1; Neurospora cras...    31   6.6  
UniRef50_A4QZA2 Cluster: Predicted protein; n=1; Magnaporthe gri...    30   8.8  

>UniRef50_Q24DM3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1622

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +2

Query: 29  MCFDFSSIYFTFINNVSYYD*KTLCELWFYPDRDLKPCICSPLLFLDDTNCV 184
           +C   S  YF FI++       +LC   F  +   K C+C P  FL D  C+
Sbjct: 778 VCILCSLNYFLFIDSTCV----SLCPQTFLENFSQKKCVCRPNSFLQDNKCI 825



 Score = 30.3 bits (65), Expect = 8.8
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +2

Query: 32  CFDFSSIYFTFINNVSYYD*KTLCELWFYPDRDLKPCICSPLLFLDDTNCV 184
           C   SS Y+ FI++       + C   F  D     CIC P  FL D  C+
Sbjct: 505 CTLCSSNYYLFIDSTCV----SSCPKTFLVDSSNTKCICRPNSFLQDNKCI 551


>UniRef50_A4XI83 Cluster: Coproporphyrinogen dehydrogenase; n=1;
           Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
           Coproporphyrinogen dehydrogenase - Caldicellulosiruptor
           saccharolyticus (strain ATCC 43494 / DSM 8903)
          Length = 486

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 155 KESIYTVLNLGQGKTTIHTMFFSRS 81
           K++IY VLNLG    T+HT+   R+
Sbjct: 348 KKTIYDVLNLGPASITVHTLSIKRA 372


>UniRef50_Q7RYE2 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 743

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +2

Query: 35  FDFSSIYFTFINNVSYYD*KTLCELWFYPDRDLK-P--CICSPLL 160
           + F  + FTFI  V  Y      ELWFYP+ D   P  C+ +P+L
Sbjct: 378 WSFLDLTFTFIFGV--YGVVRFAELWFYPEADYAIPILCVAAPVL 420


>UniRef50_A4QZA2 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 141

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
 Frame = +2

Query: 17  RTKWMCFDFSSIYFTFINNVSYYD*KT-LCELWFYP---DRDLKPCICS-PLLFLDDT 175
           +T W C DF  +Y +  + ++  D +  LC LW  P   D+  + C  + P L  DDT
Sbjct: 31  QTTWTCPDFGKVYSSGADVIASQDPQNGLCCLWGLPYLQDKSRQSCCRNDPALLNDDT 88


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,339,439
Number of Sequences: 1657284
Number of extensions: 2318337
Number of successful extensions: 4497
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4496
length of database: 575,637,011
effective HSP length: 53
effective length of database: 487,800,959
effective search space used: 10243820139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)