Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30e01
(224 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75537-5|CAA99837.3| 335|Caenorhabditis elegans Hypothetical pr... 26 3.1
U49829-8|AAV28348.1| 515|Caenorhabditis elegans Hypothetical pr... 26 3.1
U49829-7|AAA93388.3| 513|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 25 5.5
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 25 5.5
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 25 5.5
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 25 5.5
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 25 5.5
Z68341-3|CAA92766.2| 269|Caenorhabditis elegans Hypothetical pr... 25 7.2
AF025470-3|AAB71057.1| 394|Caenorhabditis elegans Hypothetical ... 25 9.6
>Z75537-5|CAA99837.3| 335|Caenorhabditis elegans Hypothetical
protein F18E2.4 protein.
Length = 335
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 99 CVNCGFTLTEI*NRVYALLC 158
C+ CG TL + NRV+ +LC
Sbjct: 119 CMACGSTLLLVINRVFDVLC 138
>U49829-8|AAV28348.1| 515|Caenorhabditis elegans Hypothetical
protein F27D9.8b protein.
Length = 515
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Frame = +2
Query: 44 SSIYFTFINNVSYYD*KTLCELWFYPDRDLKPC-----ICSPLLFLDD 172
S I F +S YD T +W Y RDL+ +C L F DD
Sbjct: 416 SGIVFDIKQGISLYDIPTKSYIWQYRFRDLQAVADDGKLCVQLSFNDD 463
>U49829-7|AAA93388.3| 513|Caenorhabditis elegans Hypothetical
protein F27D9.8a protein.
Length = 513
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Frame = +2
Query: 44 SSIYFTFINNVSYYD*KTLCELWFYPDRDLKPC-----ICSPLLFLDD 172
S I F +S YD T +W Y RDL+ +C L F DD
Sbjct: 416 SGIVFDIKQGISLYDIPTKSYIWQYRFRDLQAVADDGKLCVQLSFNDD 463
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 CLRTKWMCFDFSSIYFTFINNV-SYYD*KTLCELWFYPDR 127
CL T++MC ++ T + N+ +YY T PDR
Sbjct: 1022 CLCTRYMCAGVPAVLSTLLANINAYYAHTTATSAVSAPDR 1061
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 CLRTKWMCFDFSSIYFTFINNV-SYYD*KTLCELWFYPDR 127
CL T++MC ++ T + N+ +YY T PDR
Sbjct: 1361 CLCTRYMCAGVPAVLSTLLANINAYYAHTTATSAVSAPDR 1400
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 CLRTKWMCFDFSSIYFTFINNV-SYYD*KTLCELWFYPDR 127
CL T++MC ++ T + N+ +YY T PDR
Sbjct: 681 CLCTRYMCAGVPAVLSTLLANINAYYAHTTATSAVSAPDR 720
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 CLRTKWMCFDFSSIYFTFINNV-SYYD*KTLCELWFYPDR 127
CL T++MC ++ T + N+ +YY T PDR
Sbjct: 1019 CLCTRYMCAGVPAVLSTLLANINAYYAHTTATSAVSAPDR 1058
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 CLRTKWMCFDFSSIYFTFINNV-SYYD*KTLCELWFYPDR 127
CL T++MC ++ T + N+ +YY T PDR
Sbjct: 1022 CLCTRYMCAGVPAVLSTLLANINAYYAHTTATSAVSAPDR 1061
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 CLRTKWMCFDFSSIYFTFINNV-SYYD*KTLCELWFYPDR 127
CL T++MC ++ T + N+ +YY T PDR
Sbjct: 1361 CLCTRYMCAGVPAVLSTLLANINAYYAHTTATSAVSAPDR 1400
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 CLRTKWMCFDFSSIYFTFINNV-SYYD*KTLCELWFYPDR 127
CL T++MC ++ T + N+ +YY T PDR
Sbjct: 1019 CLCTRYMCAGVPAVLSTLLANINAYYAHTTATSAVSAPDR 1058
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 CLRTKWMCFDFSSIYFTFINNV-SYYD*KTLCELWFYPDR 127
CL T++MC ++ T + N+ +YY T PDR
Sbjct: 1022 CLCTRYMCAGVPAVLSTLLANINAYYAHTTATSAVSAPDR 1061
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 CLRTKWMCFDFSSIYFTFINNV-SYYD*KTLCELWFYPDR 127
CL T++MC ++ T + N+ +YY T PDR
Sbjct: 1361 CLCTRYMCAGVPAVLSTLLANINAYYAHTTATSAVSAPDR 1400
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 CLRTKWMCFDFSSIYFTFINNV-SYYD*KTLCELWFYPDR 127
CL T++MC ++ T + N+ +YY T PDR
Sbjct: 681 CLCTRYMCAGVPAVLSTLLANINAYYAHTTATSAVSAPDR 720
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 CLRTKWMCFDFSSIYFTFINNV-SYYD*KTLCELWFYPDR 127
CL T++MC ++ T + N+ +YY T PDR
Sbjct: 1019 CLCTRYMCAGVPAVLSTLLANINAYYAHTTATSAVSAPDR 1058
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 109 QFTQCFLVVV*NVIDKSKINRRKI 38
Q +CFL+ + N+ +SK NRR I
Sbjct: 940 QIKKCFLIDIINLCRESKENRRTI 963
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 109 QFTQCFLVVV*NVIDKSKINRRKI 38
Q +CFL+ + N+ +SK NRR I
Sbjct: 940 QIKKCFLIDIINLCRESKENRRTI 963
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 CLRTKWMCFDFSSIYFTFINNV-SYYD*KTLCELWFYPDR 127
CL T++MC ++ T + N+ +YY T PDR
Sbjct: 1022 CLCTRYMCAGVPAVLSTLLANINAYYAHTTATSAVSAPDR 1061
>Z68341-3|CAA92766.2| 269|Caenorhabditis elegans Hypothetical
protein F01G4.5 protein.
Length = 269
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 29 MCFDFSSIYFTFINNVSYYD*KTLCELWFY 118
M +DFS I+F N Y K LC L +Y
Sbjct: 131 MVYDFSQIFFLHFNCFDAYATK-LCYLCYY 159
>AF025470-3|AAB71057.1| 394|Caenorhabditis elegans Hypothetical
protein W10D9.3 protein.
Length = 394
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 14 LRTKWMCFDFSSIYFTFINNVSY 82
+ W CFDF Y F N +Y
Sbjct: 152 MENDWNCFDFVMEYMKFTNYRNY 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,058,772
Number of Sequences: 27780
Number of extensions: 64011
Number of successful extensions: 166
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 12,740,198
effective HSP length: 54
effective length of database: 11,240,078
effective search space used: 224801560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -