Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30d12
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KT43 Cluster: LEF-8; n=52; Baculoviridae|Rep: LEF-8 -... 358 8e-98
UniRef50_O12934 Cluster: Probable DNA-directed RNA polymerase su... 353 2e-96
UniRef50_O57030 Cluster: Probable DNA-directed RNA polymerase su... 319 3e-86
UniRef50_Q64804 Cluster: 16 kDa protein; n=1; Autographa califor... 275 7e-73
UniRef50_Q8JRT8 Cluster: Late expression factor 8; n=2; Phthorim... 253 3e-66
UniRef50_Q9PYP8 Cluster: ORF148; n=16; Granulovirus|Rep: ORF148 ... 244 1e-63
UniRef50_Q6QXH8 Cluster: ORF118; n=23; Granulovirus|Rep: ORF118 ... 232 5e-60
UniRef50_Q64799 Cluster: 10 kDa protein; n=1; Autographa califor... 182 9e-45
UniRef50_Q6JK79 Cluster: Late expression factor-8; n=7; Nucleopo... 130 4e-29
UniRef50_Q6SV07 Cluster: Lef-8; n=1; Wiseana cervinata nucleopol... 109 6e-23
UniRef50_Q6LCC4 Cluster: Putative uncharacterized protein; n=1; ... 109 6e-23
UniRef50_Q64803 Cluster: 20.6 kDa protein; n=1; Autographa calif... 108 1e-22
UniRef50_Q6SUZ5 Cluster: Lef-8; n=1; Lymantria monacha nucleopol... 103 5e-21
UniRef50_Q6LCC3 Cluster: Putative uncharacterized protein; n=1; ... 88 2e-16
UniRef50_Q919P3 Cluster: CUN026 putative lef-8 late transcriptio... 76 7e-13
UniRef50_Q6SV09 Cluster: Lef-8; n=1; Natada nararia granulovirus... 50 7e-05
UniRef50_O21237 Cluster: RNA polymerase subunit beta; n=1; Recli... 46 6e-04
UniRef50_Q64801 Cluster: 7 kDa protein; n=1; Autographa californ... 46 0.001
UniRef50_Q11HB3 Cluster: DNA-directed RNA polymerase subunit bet... 38 0.16
UniRef50_Q3V426 Cluster: Adult male testis cDNA, RIKEN full-leng... 38 0.21
UniRef50_A4M8H6 Cluster: DNA-directed RNA polymerase, beta subun... 38 0.21
UniRef50_O95155 Cluster: Ubiquitin conjugation factor E4 B; n=43... 38 0.21
UniRef50_Q1IHH4 Cluster: DNA-directed RNA polymerase subunit bet... 36 0.65
UniRef50_A3FMP8 Cluster: DNA-directed RNA polymerase; n=5; Veill... 35 2.0
UniRef50_P78013 Cluster: DNA-directed RNA polymerase subunit bet... 35 2.0
UniRef50_Q3VHW8 Cluster: Glycosyl transferase, family 2; n=1; Pe... 34 2.6
UniRef50_Q6F0L7 Cluster: DNA-directed RNA polymerase subunit bet... 34 2.6
UniRef50_Q9Z9M2 Cluster: DNA-directed RNA polymerase subunit bet... 34 2.6
UniRef50_Q9AIU3 Cluster: DNA-directed RNA polymerase subunit bet... 34 2.6
UniRef50_Q8JKM3 Cluster: RNA polymerase LEF-8; n=1; Heliothis ze... 34 3.5
UniRef50_A4L212 Cluster: Late expression factor 8; n=1; Gryllus ... 34 3.5
UniRef50_Q182P7 Cluster: Putative uncharacterized protein; n=2; ... 34 3.5
UniRef50_Q7URW6 Cluster: DNA-directed RNA polymerase subunit bet... 34 3.5
UniRef50_Q6YQW3 Cluster: DNA-directed RNA polymerase subunit bet... 34 3.5
UniRef50_Q8F0S2 Cluster: DNA-directed RNA polymerase subunit bet... 34 3.5
UniRef50_Q55CB6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_Q5FM97 Cluster: DNA-directed RNA polymerase subunit bet... 33 4.6
UniRef50_Q89AB4 Cluster: Exodeoxyribonuclease V gamma chain; n=1... 33 4.6
UniRef50_UPI00015BD08F Cluster: UPI00015BD08F related cluster; n... 33 6.1
UniRef50_Q636U4 Cluster: Possible esterase; n=10; Bacillus cereu... 33 6.1
UniRef50_Q8GQK6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_A0THT4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_Q9LQC3 Cluster: F28C11.19; n=33; Arabidopsis thaliana|R... 33 6.1
UniRef50_A4QSB0 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_UPI0000E4A9B9 Cluster: PREDICTED: similar to KIAA1109 p... 33 8.0
UniRef50_Q4Q6P8 Cluster: DNA-directed RNA polymerase II subunit ... 33 8.0
UniRef50_A2EFT7 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
UniRef50_P75254 Cluster: UPF0134 protein MPN524; n=3; Mycoplasma... 33 8.0
UniRef50_Q8EWX1 Cluster: DNA-directed RNA polymerase subunit bet... 33 8.0
>UniRef50_Q4KT43 Cluster: LEF-8; n=52; Baculoviridae|Rep: LEF-8 -
Chrysodeixis chalcites nucleopolyhedrovirus
Length = 946
Score = 358 bits (880), Expect = 8e-98
Identities = 160/219 (73%), Positives = 187/219 (85%)
Frame = +2
Query: 2 STDKNYVALDDGLVLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYKVYVYFRQIKN 181
S + N+V ++ G LYMAGV+VSN KI W+YDG+RYKIE C N NF + K+Y+YFR+I N
Sbjct: 701 SKENNFVQVEGGNFLYMAGVVVSNVKIGWIYDGKRYKIEACKNKNFFLSKIYIYFREIFN 760
Query: 182 QKIEKLDASMVVNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEWMAEDGT 361
Q+IE LD++M V+ D V +K+ ++TST+DL+GIKICGIHGQKGV NG EDLTEWMAEDGT
Sbjct: 761 QRIECLDSTMAVHNDTVYVKVTMITSTSDLQGIKICGIHGQKGVMNGSEDLTEWMAEDGT 820
Query: 362 HAQICLSPVSFLSRQSNFDKIERKYVVRGGNHDDPHAKRYPIFNIPYMLFNNTPDNIFKE 541
AQICLSP+SFLSRQSNF+ IE KYVVRGGNH D AKRYPIFNIPYMLFNNTPDNIFKE
Sbjct: 821 SAQICLSPISFLSRQSNFNDIETKYVVRGGNHHDLEAKRYPIFNIPYMLFNNTPDNIFKE 880
Query: 542 FIKTNHTGHEKVEGTRFDQWTKNQSFVGNRMSESLHWMR 658
FIK+N+TGHEKVEGTR DQWT NQSFVGNR+SESL +R
Sbjct: 881 FIKSNYTGHEKVEGTRLDQWTINQSFVGNRLSESLQCVR 919
>UniRef50_O12934 Cluster: Probable DNA-directed RNA polymerase subunit
beta; n=46; Nucleopolyhedrovirus|Rep: Probable
DNA-directed RNA polymerase subunit beta - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 884
Score = 353 bits (868), Expect = 2e-96
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = +2
Query: 14 NYVALDDGLVLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYKVYVYFRQIKNQKIE 193
N V L D +V Y AG ++S AKI W +DG+R +E CTNG NVYKVYV+FR+ +NQ +E
Sbjct: 643 NCVVLPDNMVQYFAGTVLSGAKIVWAHDGKRCMVEACTNGAHNVYKVYVFFRRTRNQAVE 702
Query: 194 KLDASMVVNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEWMAEDGTHAQI 373
L ASM + GD V+++ +VTST+DLEG+K+C +HGQKGV N EDLTEWMAEDGTHAQI
Sbjct: 703 SLAASMTLAGDAVIVRTAVVTSTDDLEGVKVCSVHGQKGVLNRSEDLTEWMAEDGTHAQI 762
Query: 374 CLSPVSFLSRQSNFDKIERKYVVRGGNHDDPHAKRYPIFNIPYMLFNNTPDNIFKEFIKT 553
CLSPVS+LSRQSNF+++ERKYVVRGGNH DP A+RYPIFNIPYMLFNNTPDNI+KEF K
Sbjct: 763 CLSPVSYLSRQSNFERLERKYVVRGGNHADPRARRYPIFNIPYMLFNNTPDNIYKEFNKK 822
Query: 554 NHTGHEKVEGTRFDQWTKNQSFVGNRMSESLHWMR 658
N+TGHEKVEGTRFDQWTKNQSFVGNR++ESL WMR
Sbjct: 823 NYTGHEKVEGTRFDQWTKNQSFVGNRLAESLQWMR 857
>UniRef50_O57030 Cluster: Probable DNA-directed RNA polymerase subunit
beta; n=16; Nucleopolyhedrovirus|Rep: Probable
DNA-directed RNA polymerase subunit beta - Spodoptera
littoralis nuclear polyhedrosis virus (SlNPV)
Length = 909
Score = 319 bits (784), Expect = 3e-86
Identities = 145/219 (66%), Positives = 175/219 (79%)
Frame = +2
Query: 2 STDKNYVALDDGLVLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYKVYVYFRQIKN 181
S N+V ++G VL MAGV+VSN KINW +DG+RYKIETC N +F ++K+Y + R+I++
Sbjct: 665 SESNNFVDTNEGHVLAMAGVIVSNVKINWTHDGKRYKIETCKNKSFYIFKIYTFLRKIRS 724
Query: 182 QKIEKLDASMVVNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEWMAEDGT 361
Q+IE +DA + D V +K IVTSTN+L+GIKICGIHGQKGV N EDLTEWMAEDGT
Sbjct: 725 QRIELIDAKLSTLNDFVYVKFSIVTSTNNLDGIKICGIHGQKGVMNSSEDLTEWMAEDGT 784
Query: 362 HAQICLSPVSFLSRQSNFDKIERKYVVRGGNHDDPHAKRYPIFNIPYMLFNNTPDNIFKE 541
HAQICLSPVSFLSRQSNFD IERKYVVRGG+H DP A RYP+F IPYMLFNNTP+ I +
Sbjct: 785 HAQICLSPVSFLSRQSNFDYIERKYVVRGGDHTDPSAVRYPMFRIPYMLFNNTPE-ILQR 843
Query: 542 FIKTNHTGHEKVEGTRFDQWTKNQSFVGNRMSESLHWMR 658
+TN+TGHEK+EGTR DQW+ NQSF GNR +E L +R
Sbjct: 844 IPQTNYTGHEKIEGTRLDQWSINQSFAGNRWAEGLQCVR 882
>UniRef50_Q64804 Cluster: 16 kDa protein; n=1; Autographa
californica nucleopolyhedrovirus|Rep: 16 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 143
Score = 275 bits (674), Expect = 7e-73
Identities = 131/143 (91%), Positives = 132/143 (92%)
Frame = -3
Query: 457 VISTAHHIFALNFIKIRLARQKRDGRQAYLGVRTIFGHPLGQVFAAVKHTFLTVNATYFY 278
+ISTAHHIFALNFIKI LARQKRDGRQAYLGVRTIFGHPLGQVFAAVKHTFLTVNATYFY
Sbjct: 1 MISTAHHIFALNFIKIGLARQKRDGRQAYLGVRTIFGHPLGQVFAAVKHTFLTVNATYFY 60
Query: 277 SFQIVGGRDYDYFKXXXXXXXXXAGVEFFNFLIFNLSKVNVHFVNVKIAVGARFNFVPSA 98
SFQIVGGRDYDYFK AGVEFFNFLIFNLSKVNVHFVNVKIAVGARFNFVPSA
Sbjct: 61 SFQIVGGRDYDYFKHNVVAVNHHAGVEFFNFLIFNLSKVNVHFVNVKIAVGARFNFVPSA 120
Query: 97 VVHPINFCVAHQHTGHVQHKSVV 29
VVHPIN CVAHQHTGHVQHKSVV
Sbjct: 121 VVHPINLCVAHQHTGHVQHKSVV 143
>UniRef50_Q8JRT8 Cluster: Late expression factor 8; n=2; Phthorimaea
operculella granulovirus|Rep: Late expression factor 8 -
Phthorimaea operculella granulovirus
Length = 827
Score = 253 bits (619), Expect = 3e-66
Identities = 115/216 (53%), Positives = 158/216 (73%), Gaps = 1/216 (0%)
Frame = +2
Query: 14 NYVALDDGLVLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYKVYVYFRQIKNQKIE 193
N +A++ L + G L+ + KI W +DG++YKIE CT+ ++VYK Y+YFR++ Q +
Sbjct: 592 NIIAVEGNNCLCLFGTLICSHKIAWNHDGKKYKIEYCTSKQWHVYKFYMYFRRVHGQTVH 651
Query: 194 KLDASMVVN-GDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEWMAEDGTHAQ 370
K+ + MV + +NV +K+ +V + NDLEG+KICG+HGQKGV N EDL+E++ +DG HAQ
Sbjct: 652 KVHSEMVCDDNNNVFVKLELVYTVNDLEGLKICGVHGQKGVLNSAEDLSEYVTKDGVHAQ 711
Query: 371 ICLSPVSFLSRQSNFDKIERKYVVRGGNHDDPHAKRYPIFNIPYMLFNNTPDNIFKEFIK 550
ICLSP+S+LSRQ+NFD + K + G KRYP+ IPYM FNNTPDNI+KEFI
Sbjct: 712 ICLSPISYLSRQTNFDGMVVKTCTKNG-------KRYPLILIPYMFFNNTPDNIYKEFIG 764
Query: 551 TNHTGHEKVEGTRFDQWTKNQSFVGNRMSESLHWMR 658
N TG+EKVEGTR DQW+ NQSF+GNR++E LH +R
Sbjct: 765 KNITGYEKVEGTRLDQWSINQSFMGNRLAEGLHCVR 800
>UniRef50_Q9PYP8 Cluster: ORF148; n=16; Granulovirus|Rep: ORF148 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 859
Score = 244 bits (598), Expect = 1e-63
Identities = 117/216 (54%), Positives = 152/216 (70%), Gaps = 1/216 (0%)
Frame = +2
Query: 14 NYVALDDGLVLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYKVYVYFRQIKNQKIE 193
N + + G L + G +V +KINW +DG+++KIE CTN +VY++Y+Y+R++ Q IE
Sbjct: 622 NTMDVQGGHSLCIFGTVVCGSKINWSHDGKKFKIEYCTNKLNHVYRIYMYYRRVPGQSIE 681
Query: 194 KLDASM-VVNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEWMAEDGTHAQ 370
L + + + D LKI +V S +DLEG+KICGIHGQKGV N EDL+ W + DG HAQ
Sbjct: 682 LLTSELNQIKNDEFNLKIQLVISVSDLEGLKICGIHGQKGVLNEAEDLSMWRSSDGVHAQ 741
Query: 371 ICLSPVSFLSRQSNFDKIERKYVVRGGNHDDPHAKRYPIFNIPYMLFNNTPDNIFKEFIK 550
ICLSP+SFLSRQSNFD + K G HD YP+F IPYM FNNTPDNI+KEFI
Sbjct: 742 ICLSPISFLSRQSNFDGLPTKLCHING-HD------YPMFLIPYMFFNNTPDNIYKEFIG 794
Query: 551 TNHTGHEKVEGTRFDQWTKNQSFVGNRMSESLHWMR 658
+ TG+EK+EGTR DQW+ NQSF+GNR+ E LH +R
Sbjct: 795 RSITGYEKLEGTRLDQWSINQSFMGNRLPEGLHCVR 830
>UniRef50_Q6QXH8 Cluster: ORF118; n=23; Granulovirus|Rep: ORF118 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 883
Score = 232 bits (568), Expect = 5e-60
Identities = 109/222 (49%), Positives = 154/222 (69%), Gaps = 3/222 (1%)
Frame = +2
Query: 2 STDKNYVALDDGLVLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYKVYVYFRQIKN 181
S+ N + ++ L + G LV K+NW YDG++YKIE C + +++VYK Y+YFR++K
Sbjct: 641 SSHNNIIDVEGWNRLCLFGTLVCGVKMNWNYDGKKYKIEYCPSKSYHVYKFYMYFRKVKG 700
Query: 182 QKIEKLDASMVVNGDN-VMLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEWMAEDG 358
QK+E +++ M N D V +K+ +V S +DLEG+KICG+HGQKG+ N EDL+ + A+
Sbjct: 701 QKVETVNSEMFYNDDGTVTVKLTLVYSVSDLEGLKICGVHGQKGILNSSEDLSRFKADSD 760
Query: 359 T--HAQICLSPVSFLSRQSNFDKIERKYVVRGGNHDDPHAKRYPIFNIPYMLFNNTPDNI 532
+ HAQICLSP+S++SRQ+N + + G K YP+ IPYM FNNTPDNI
Sbjct: 761 SSIHAQICLSPISYISRQTNMVGMRTEKCTIDG-------KCYPLVLIPYMFFNNTPDNI 813
Query: 533 FKEFIKTNHTGHEKVEGTRFDQWTKNQSFVGNRMSESLHWMR 658
+KEFI N TG+EK+EGTR DQW+ NQSF+GNR++E LH +R
Sbjct: 814 YKEFIGKNITGYEKLEGTRLDQWSINQSFMGNRLAEGLHCVR 855
>UniRef50_Q64799 Cluster: 10 kDa protein; n=1; Autographa
californica nucleopolyhedrovirus|Rep: 10 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 89
Score = 182 bits (442), Expect = 9e-45
Identities = 86/89 (96%), Positives = 86/89 (96%)
Frame = +3
Query: 354 MVRTPKYACRPSRFCLASLILIKLSANMWCAVEITTTRTPSVIPSSTYHTCYLIIHPTIF 533
MVRTPKYACRPSRFCLAS ILIKLSANMWCAVEI TTRTPSVIPSSTYHTCYLIIHPTIF
Sbjct: 1 MVRTPKYACRPSRFCLASPILIKLSANMWCAVEIMTTRTPSVIPSSTYHTCYLIIHPTIF 60
Query: 534 SKNLLKQTTLDTKKSKALASINGQRINRS 620
SKNLLKQ TLDTKKSKALASINGQRINRS
Sbjct: 61 SKNLLKQATLDTKKSKALASINGQRINRS 89
>UniRef50_Q6JK79 Cluster: Late expression factor-8; n=7;
Nucleopolyhedrovirus|Rep: Late expression factor-8 -
Neodiprion sertifer NPV
Length = 846
Score = 130 bits (313), Expect = 4e-29
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 1/209 (0%)
Frame = +2
Query: 35 GLVLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYKVYVYFRQIKNQKIEKLDASMV 214
G VL + S INW G++ KI + + N VYK+ +Y ++ + +
Sbjct: 616 GYVLINVCQITSEFPINWNTLGKKLKITSLKSKNMYVYKIMMYVHDNFKKESLSVHCEAI 675
Query: 215 VNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEWMAEDGTHAQICLSPVSF 394
++KI V ++ GIK+C IHGQKGV N DL +W++ED H Q+ +SP+SF
Sbjct: 676 KINKEFIVKIRHVFCYDNFTGIKLCSIHGQKGVTNVESDLNDWVSEDHIHPQLMISPISF 735
Query: 395 LSRQSNF-DKIERKYVVRGGNHDDPHAKRYPIFNIPYMLFNNTPDNIFKEFIKTNHTGHE 571
L+RQ+ D I++K++ G ++ IPY +F+ TPD+ E+ TG E
Sbjct: 736 LNRQTIIGDNIDKKFIRNGEQFS-------VMYKIPYTIFHTTPDDAHTEYCDQIKTGLE 788
Query: 572 KVEGTRFDQWTKNQSFVGNRMSESLHWMR 658
K+EGTR D +T N +V N + +L +R
Sbjct: 789 KIEGTRLDNYTINNHYVSNMQTLNLQDIR 817
>UniRef50_Q6SV07 Cluster: Lef-8; n=1; Wiseana cervinata
nucleopolyhedrovirus|Rep: Lef-8 - Wiseana cervinata
nucleopolyhedrovirus
Length = 129
Score = 109 bits (262), Expect = 6e-23
Identities = 45/98 (45%), Positives = 73/98 (74%)
Frame = +2
Query: 14 NYVALDDGLVLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYKVYVYFRQIKNQKIE 193
N V+++ G L++ G +VSN KI WV+DG+R+KIE+CT+ N +V +++VY R+ K Q+IE
Sbjct: 32 NVVSVEGGNELFIIGTVVSNLKIQWVHDGKRFKIESCTSKNHHVSRIFVYIRRTKTQRIE 91
Query: 194 KLDASMVVNGDNVMLKIVIVTSTNDLEGIKICGIHGQK 307
+++ + + GD+V +K I+T T LEG+K+CGI GQ+
Sbjct: 92 SIESGLNLVGDHVFVKWTILTRTQSLEGLKVCGIQGQR 129
>UniRef50_Q6LCC4 Cluster: Putative uncharacterized protein; n=1;
Choristoneura fumiferana MNPV|Rep: Putative
uncharacterized protein - Choristoneura fumiferana
nuclear polyhedrosis virus (CfMNPV)
Length = 184
Score = 109 bits (262), Expect = 6e-23
Identities = 63/152 (41%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
Frame = -3
Query: 457 VISTAHHIFALNFIKIRLARQKRDGRQAYLGVRTIFGHPLGQVFAAVKHTFLT-VNATYF 281
+++ AHH+ A N +K+ L+R+ R GRQA L VR IF HPLG+V AAV+H LT VN +
Sbjct: 1 MVAAAHHVLAFNPLKVGLSRKVRHGRQANLRVRAIFSHPLGEVLAAVEHALLTVVNTAHL 60
Query: 280 YSFQIVGGRDYDYFKXXXXXXXXXAGVEFFNFLIFNLSKVNVHFVNVKIAVGARFNFVPS 101
+FQ+VGGR AG + + L+ SK ++FV+V+ AVGAR + P
Sbjct: 61 NAFQVVGGRYDRGAHDHRVARYGHAGAKRLDRLVARSSKKRIYFVHVERAVGARLDHAPF 120
Query: 100 AVVHPINFCVAHQHTGHVQHKSVV*RNVILVG 5
AV+ P +F A QH H VV ++ ++VG
Sbjct: 121 AVMRPRDFNAA-QHRAHKVLHHVVGQHHVVVG 151
>UniRef50_Q64803 Cluster: 20.6 kDa protein; n=1; Autographa
californica nucleopolyhedrovirus|Rep: 20.6 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 187
Score = 108 bits (260), Expect = 1e-22
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 658 AHPMQTFRHSVAYERLILCPLIEASAFDFFVSSVVCFNKFFENIVGCIIK 509
AHPMQTFRHSVAYERLILCPLIEASAFDFFVSSV CFNKFFENIVGCIIK
Sbjct: 138 AHPMQTFRHSVAYERLILCPLIEASAFDFFVSSVACFNKFFENIVGCIIK 187
>UniRef50_Q6SUZ5 Cluster: Lef-8; n=1; Lymantria monacha
nucleopolyhedrovirus|Rep: Lef-8 - Lymantria monacha
nucleopolyhedrovirus
Length = 142
Score = 103 bits (246), Expect = 5e-21
Identities = 45/80 (56%), Positives = 56/80 (70%)
Frame = +2
Query: 71 NAKINWVYDGRRYKIETCTNGNFNVYKVYVYFRQIKNQKIEKLDASMVVNGDNVMLKIVI 250
+ KI W+Y G+RYKIETC N N V+K+Y+Y ++K Q++E+L S GD V LKI
Sbjct: 63 SVKIAWIYXGKRYKIETCKNKNHYVFKMYLYLXKLKGQRVERLHGSFYSAGDTVHLKITT 122
Query: 251 VTSTNDLEGIKICGIHGQKG 310
V STNDL GI ICGIHGQ G
Sbjct: 123 VCSTNDLRGIXICGIHGQXG 142
>UniRef50_Q6LCC3 Cluster: Putative uncharacterized protein; n=1;
Choristoneura fumiferana MNPV|Rep: Putative
uncharacterized protein - Choristoneura fumiferana
nuclear polyhedrosis virus (CfMNPV)
Length = 120
Score = 88.2 bits (209), Expect = 2e-16
Identities = 47/102 (46%), Positives = 57/102 (55%)
Frame = +3
Query: 354 MVRTPKYACRPSRFCLASLILIKLSANMWCAVEITTTRTPSVIPSSTYHTCYLIIHPTIF 533
M RT K+ACRP R S L L+A+ WCA T RT S IP T HTC L PT
Sbjct: 1 MARTRKFACRPCRTFRDSPTLSGLNASTWCAAATTPIRTRSAIPYLTSHTCCLTTRPTTS 60
Query: 534 SKNLLKQTTLDTKKSKALASINGQRINRS*ATECRKVCIGCA 659
+++ K TT TKK KA A +G + N S AT ++ C GCA
Sbjct: 61 TRSSTKTTTRATKKWKARALTSGPKTNHSWATALQRACSGCA 102
>UniRef50_Q919P3 Cluster: CUN026 putative lef-8 late transcription
factor, Rna_Pol_Beta motif, similar to AcMNPV ORF50; n=1;
Culex nigripalpus NPV|Rep: CUN026 putative lef-8 late
transcription factor, Rna_Pol_Beta motif, similar to
AcMNPV ORF50 - Culex nigripalpus NPV
Length = 922
Score = 76.2 bits (179), Expect = 7e-13
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
Frame = +2
Query: 266 DLEGIKICGIHGQKGVFNGGEDLTEWMAEDGTHAQICLSPVSFLSRQSNFDKIER-KYVV 442
++EG+KIC IHGQKGV D +E+ + G QI +SP+++L RQ+ F++ + +V
Sbjct: 748 NIEGLKICSIHGQKGVLAKPMDFSEFRSPCGVVPQIAMSPLAYLKRQTTFNQCPQVSTIV 807
Query: 443 RGGNHDDPHAKRYPIFNIPYMLFNNTPDNIFKEFIKTNHTGHEKVEGTRFDQWTKNQSFV 622
RG Y I +PY LF ++ I +++ + G E+ EG R D +T + F
Sbjct: 808 RG--------IEYTIVKVPYSLFMHSTSYIRRDYDERVLYGQERAEGARTDMYTISNVFH 859
Query: 623 GNRMSESLHWMR 658
N + S+ R
Sbjct: 860 ANSIPLSMQAQR 871
>UniRef50_Q6SV09 Cluster: Lef-8; n=1; Natada nararia
granulovirus|Rep: Lef-8 - Natada nararia granulovirus
Length = 111
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/71 (28%), Positives = 41/71 (57%)
Frame = +2
Query: 2 STDKNYVALDDGLVLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYKVYVYFRQIKN 181
S + N + ++ L + G L ++KINW +DG++ +IE + N+ VY Y+Y+ +
Sbjct: 22 SLENNSILVEGNHCLCIFGTLFCHSKINWNHDGQKSQIEYWVSKNWRVYTTYMYYHTLNG 81
Query: 182 QKIEKLDASMV 214
+ +E + + +V
Sbjct: 82 RLVETMTSQLV 92
>UniRef50_O21237 Cluster: RNA polymerase subunit beta; n=1;
Reclinomonas americana|Rep: RNA polymerase subunit beta -
Reclinomonas americana
Length = 1478
Score = 46.4 bits (105), Expect = 6e-04
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 107 YKIETCTNGNFNVYKVYVYFRQIKNQKIEKLDASMVVNGDNVMLKIVIVTSTNDLEGIKI 286
Y I+ NFNV++ F Q K + I K + N M+K+V+ N G K+
Sbjct: 1143 YYIKEYNKQNFNVFENDQIFVQKKTKSINKKKDCLKNNYSLRMVKVVVACKHNIQVGDKL 1202
Query: 287 CGIHGQKGVFNGGEDLTEW-MAEDGTHAQICLSPVSFLSRQS 409
G +G KGV + L + DGT I LSP+ SR +
Sbjct: 1203 TGRYGNKGVISRILSLEDMPYLRDGTPLDIVLSPLGVSSRMN 1244
>UniRef50_Q64801 Cluster: 7 kDa protein; n=1; Autographa californica
nucleopolyhedrovirus|Rep: 7 kDa protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 61
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1
Query: 598 MDKESIVRRQQNVGKFALDAR 660
MDKESIVRRQQNVGKFALDAR
Sbjct: 1 MDKESIVRRQQNVGKFALDAR 21
>UniRef50_Q11HB3 Cluster: DNA-directed RNA polymerase subunit beta;
n=740; Bacteria|Rep: DNA-directed RNA polymerase subunit
beta - Mesorhizobium sp. (strain BNC1)
Length = 1379
Score = 38.3 bits (85), Expect = 0.16
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 185 KIEKLD-ASMVVNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEW-MAEDG 358
K+EK+ + G M+K+ + G K+ G HG KGV + + + EDG
Sbjct: 1054 KVEKVQRGDEMPPGVMKMVKVFVAVKRKMQPGDKMAGRHGNKGVVSRIVPIEDMPFLEDG 1113
Query: 359 THAQICLSPVSFLSRQS 409
TH I L+P+ SR +
Sbjct: 1114 THVDIVLNPLGVPSRMN 1130
>UniRef50_Q3V426 Cluster: Adult male testis cDNA, RIKEN full-length
enriched library, clone:4933406G05
product:ubiquitination factor E4B, UFD2 homolog (S.
cerevisiae), full insert sequence; n=2; Murinae|Rep:
Adult male testis cDNA, RIKEN full-length enriched
library, clone:4933406G05 product:ubiquitination factor
E4B, UFD2 homolog (S. cerevisiae), full insert sequence
- Mus musculus (Mouse)
Length = 426
Score = 37.9 bits (84), Expect = 0.21
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 350 EDGTHAQICLSP-VSFLSRQSNFDKIERKYVVRGGNHDDPHAKRYPIFNIPYMLFNNTPD 526
E+ ++C P VS L I +V G+ P + + P F +PYML N P
Sbjct: 311 EEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLVPYMLCRNLPY 370
Query: 527 NIFKEFIKTNHTGHE 571
+E ++T H E
Sbjct: 371 GFIQELVRTTHQDEE 385
>UniRef50_A4M8H6 Cluster: DNA-directed RNA polymerase, beta subunit;
n=3; Thermotogaceae|Rep: DNA-directed RNA polymerase,
beta subunit - Petrotoga mobilis SJ95
Length = 1187
Score = 37.9 bits (84), Expect = 0.21
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +2
Query: 167 RQIKNQKIEKLDASMVVNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFN---GGEDLT 337
R I Q ++ D + G N +K+ I T G K+ G HG KGV + ED+
Sbjct: 905 RVIDVQIFDRKDIPSLEIGVNKYVKVFIATKKTLQVGDKLAGRHGNKGVISTILNKEDMP 964
Query: 338 EWMAEDGTHAQICLSPVSFLSRQS 409
DGT Q+ LSP+ SR +
Sbjct: 965 --FLPDGTPLQMLLSPLGVPSRMN 986
>UniRef50_O95155 Cluster: Ubiquitin conjugation factor E4 B; n=43;
Eumetazoa|Rep: Ubiquitin conjugation factor E4 B - Homo
sapiens (Human)
Length = 1302
Score = 37.9 bits (84), Expect = 0.21
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 350 EDGTHAQICLSP-VSFLSRQSNFDKIERKYVVRGGNHDDPHAKRYPIFNIPYMLFNNTPD 526
E+ ++C P VS L I +V G+ P + + P F +PYML N P
Sbjct: 440 EEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLVPYMLCRNLPY 499
Query: 527 NIFKEFIKTNHTGHE 571
+E ++T H E
Sbjct: 500 GFIQELVRTTHQDEE 514
>UniRef50_Q1IHH4 Cluster: DNA-directed RNA polymerase subunit beta;
n=6; cellular organisms|Rep: DNA-directed RNA polymerase
subunit beta - Acidobacteria bacterium (strain Ellin345)
Length = 1489
Score = 36.3 bits (80), Expect = 0.65
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +2
Query: 167 RQIKNQKIEKLD-ASMVVNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFN---GGEDL 334
R+I +KIEKL + G ++K+ I G K+ G HG KGV ED+
Sbjct: 1164 RKIVREKIEKLQKGDELPPGVIKLVKVYIAMKRKLSVGDKMAGRHGNKGVIARILPEEDM 1223
Query: 335 TEWMAEDGTHAQICLSPVSFLSRQS 409
EDGT +I L+P+ SR +
Sbjct: 1224 P--YLEDGTPVEIVLNPLGVPSRMN 1246
>UniRef50_A3FMP8 Cluster: DNA-directed RNA polymerase; n=5;
Veillonella|Rep: DNA-directed RNA polymerase -
Veillonella montpellierensis
Length = 1124
Score = 34.7 bits (76), Expect = 2.0
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 221 GDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFN---GGEDLTEWMAEDGTHAQICLSPVS 391
G N ++++ I EG K+ G HG KGV + ED+ DGT QI L+P+
Sbjct: 780 GVNKLVRVYIAQKRKIHEGDKMAGRHGNKGVVSRVMRREDMP--FLPDGTPVQIVLNPLG 837
Query: 392 FLSRQS 409
SR +
Sbjct: 838 VPSRMN 843
>UniRef50_P78013 Cluster: DNA-directed RNA polymerase subunit beta;
n=11; Mycoplasma|Rep: DNA-directed RNA polymerase subunit
beta - Mycoplasma pneumoniae
Length = 1391
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 233 MLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEW-MAEDGTHAQICLSPVSFLSRQS 409
M+K+ +V G K+ G HG KGV + + + EDGT I L+P+ SR +
Sbjct: 1042 MIKVYVVQKRKIQIGDKLAGRHGNKGVISKVVPVADMPHLEDGTPVDILLNPLGVPSRMN 1101
>UniRef50_Q3VHW8 Cluster: Glycosyl transferase, family 2; n=1;
Pelodictyon phaeoclathratiforme BU-1|Rep: Glycosyl
transferase, family 2 - Pelodictyon phaeoclathratiforme
BU-1
Length = 252
Score = 34.3 bits (75), Expect = 2.6
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +2
Query: 14 NYVALDDGLV-LYMAGVLVSNAKINWVYDGRRYKIETCT-NG-NFNVYKVY-VYFRQI 175
NY+ + D +V + GV N K NW+ + R + CT NG + N++KVY YFR++
Sbjct: 189 NYLYMSDVIVRMRTGGVSTRNLKSNWILN--REILRACTDNGIDTNIFKVYSKYFRKV 244
>UniRef50_Q6F0L7 Cluster: DNA-directed RNA polymerase subunit beta;
n=277; Bacteria|Rep: DNA-directed RNA polymerase subunit
beta - Mesoplasma florum (Acholeplasma florum)
Length = 1284
Score = 34.3 bits (75), Expect = 2.6
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Frame = +2
Query: 182 QKIEKLDASMVVNGDNV--------MLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLT 337
Q +++ A N D + ++K+ IV EG K+ G HG KG+ + +
Sbjct: 958 QSVKRFKAKSAANPDGIDLPADVLEVIKVYIVQKRKIQEGDKMSGRHGNKGIISKVLPVE 1017
Query: 338 EW-MAEDGTHAQICLSPVSFLSRQS 409
+ EDGT I L+P SR +
Sbjct: 1018 DMPHLEDGTPVDILLNPQGIPSRMN 1042
>UniRef50_Q9Z9M2 Cluster: DNA-directed RNA polymerase subunit beta;
n=111; Bacteria|Rep: DNA-directed RNA polymerase subunit
beta - Bacillus halodurans
Length = 1180
Score = 34.3 bits (75), Expect = 2.6
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 200 DASMVVNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFN---GGEDLTEWMAEDGTHAQ 370
D + G N ++++ IV EG K+ G HG KGV + ED+ DGT
Sbjct: 898 DGDELPPGVNQLVRVYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMP--YLPDGTPID 955
Query: 371 ICLSPVSFLSRQS 409
I L+P+ SR +
Sbjct: 956 IMLNPLGVPSRMN 968
>UniRef50_Q9AIU3 Cluster: DNA-directed RNA polymerase subunit beta;
n=106; cellular organisms|Rep: DNA-directed RNA
polymerase subunit beta - Anaplasma phagocytophilum
(Ehrlichia phagocytophila)
Length = 1394
Score = 34.3 bits (75), Expect = 2.6
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +2
Query: 179 NQKIEKLDASM-VVNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEW-MAE 352
+QKI+KL+ + G ++K+ + N G K+ G HG KGV + + + E
Sbjct: 1067 DQKIDKLNYGYDLPQGVLTIVKVFVAVKHNLQPGDKMAGRHGNKGVISRIVPVEDMPHLE 1126
Query: 353 DGTHAQICLSPVSFLSRQS 409
DGT I L+ + SR +
Sbjct: 1127 DGTPVDIILNSLGVPSRMN 1145
>UniRef50_Q8JKM3 Cluster: RNA polymerase LEF-8; n=1; Heliothis zea
virus 1|Rep: RNA polymerase LEF-8 - Heliothis zea virus 1
Length = 1263
Score = 33.9 bits (74), Expect = 3.5
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Frame = +2
Query: 32 DGLVLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYKVYVYFRQIKNQKIEKLDASM 211
DG++++ GVL+++ ++ RR + + N ++ Y+ +K + +D+
Sbjct: 781 DGVIVF--GVLITDHQVRIQ---RRRSVYIHKSFIKNTFR-YLITMSDPLRKSKTIDSFF 834
Query: 212 VVNGDNVMLKIVIVTSTNDLEGI--KICGIHGQKGVFNGGEDLTE---WMAEDG-THAQI 373
+N N I I + G+ K+ +HGQKG+ + +DL++ W A H QI
Sbjct: 835 QINNTNQKSMISIHYHYTERLGVGTKLANLHGQKGIVSSVKDLSQYQFWTASGKMVHPQI 894
Query: 374 CLSPVSFLSRQSN 412
S S + R ++
Sbjct: 895 LFSKQSLVGRTTS 907
>UniRef50_A4L212 Cluster: Late expression factor 8; n=1; Gryllus
bimaculatus nudivirus|Rep: Late expression factor 8 -
Gryllus bimaculatus nudivirus
Length = 923
Score = 33.9 bits (74), Expect = 3.5
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 272 EGIKICGIHGQKGVFNGGEDLTE--WMAEDGT--HAQICLSPVSFLSR 403
EG K+ HGQK + + DL+ + DG HAQ+ +PVS LSR
Sbjct: 738 EGSKLANGHGQKNIISKCMDLSSICGVTRDGRKIHAQLLYNPVSILSR 785
>UniRef50_Q182P7 Cluster: Putative uncharacterized protein; n=2;
Clostridium difficile|Rep: Putative uncharacterized
protein - Clostridium difficile (strain 630)
Length = 184
Score = 33.9 bits (74), Expect = 3.5
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 161 YFRQIKNQKIEKLDASMVVNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTE 340
Y++ + + IEK+D S ++N D + IV+ TNDL KIC + + G LT
Sbjct: 123 YYKNMFIEAIEKIDNSNLLNEDGI---IVVEHDTNDLFPDKICKLEKTRDKKYGNTTLTF 179
Query: 341 WMAE 352
+ E
Sbjct: 180 YKME 183
>UniRef50_Q7URW6 Cluster: DNA-directed RNA polymerase subunit beta;
n=5; Planctomycetales|Rep: DNA-directed RNA polymerase
subunit beta - Rhodopirellula baltica
Length = 1240
Score = 33.9 bits (74), Expect = 3.5
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 233 MLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEW-MAEDGTHAQICLSPVSFLSRQS 409
M+KI I T G K+ G HG KGV + + DGT QI L+P+ SR +
Sbjct: 999 MVKIYIATKRTISVGDKMAGRHGNKGVIAKILPIEDMPFLPDGTPIQIMLNPLGVPSRMN 1058
>UniRef50_Q6YQW3 Cluster: DNA-directed RNA polymerase subunit beta;
n=21; Mollicutes|Rep: DNA-directed RNA polymerase subunit
beta - Onion yellows phytoplasma
Length = 1273
Score = 33.9 bits (74), Expect = 3.5
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 221 GDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFN---GGEDLTEWMAEDGTHAQICLSPVS 391
G N +++ I EG K+ G HG KGV + EDL +MA DGT I L+P+
Sbjct: 1010 GVNENIRVFIAKKRKINEGDKMAGRHGNKGVISRILPKEDL-PYMA-DGTPIDIMLNPLG 1067
Query: 392 FLSRQS 409
SR +
Sbjct: 1068 VPSRMN 1073
>UniRef50_Q8F0S2 Cluster: DNA-directed RNA polymerase subunit beta;
n=25; Leptospira|Rep: DNA-directed RNA polymerase subunit
beta - Leptospira interrogans
Length = 1226
Score = 33.9 bits (74), Expect = 3.5
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 221 GDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNG--GEDLTEWMAEDGTHAQICLSPVSF 394
G M+K+ + L G K+ G HG KGV E+ +M EDGT I L+P+
Sbjct: 954 GVEEMVKVFVARKRKLLVGDKMAGRHGNKGVVARVMAEEDMPYM-EDGTPLDIVLNPLGV 1012
Query: 395 LSRQS 409
SR +
Sbjct: 1013 PSRMN 1017
>UniRef50_Q55CB6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1362
Score = 33.5 bits (73), Expect = 4.6
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +3
Query: 438 WCAVEITTTRTPS--VIPSSTYHTCYLIIHPTIFSKNLLKQTT-LDTKKSKALASINGQR 608
WC ++T + TP ++PS C II P+I + N T+ ++T + A AS
Sbjct: 549 WCWSQLTKSSTPIHYLLPSLLDQLCKNIIEPSINNNNTSSTTSIINTSTTAAAASTTASN 608
Query: 609 INRS*AT 629
N + AT
Sbjct: 609 ANTTAAT 615
>UniRef50_Q5FM97 Cluster: DNA-directed RNA polymerase subunit beta;
n=336; Bacteria|Rep: DNA-directed RNA polymerase subunit
beta - Lactobacillus acidophilus
Length = 1213
Score = 33.5 bits (73), Expect = 4.6
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +2
Query: 221 GDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNG---GEDLTEWMAEDGTHAQICLSPVS 391
G N M+++ I G K+ G HG KG ED+ DGT ICL+P+
Sbjct: 902 GVNTMVRVYIAQKRKIQVGDKMSGRHGNKGTVAAVMPEEDMP--YLPDGTPVDICLNPMG 959
Query: 392 FLSRQS 409
SR +
Sbjct: 960 VPSRMN 965
>UniRef50_Q89AB4 Cluster: Exodeoxyribonuclease V gamma chain; n=1;
Buchnera aphidicola (Baizongia pistaciae)|Rep:
Exodeoxyribonuclease V gamma chain - Buchnera aphidicola
subsp. Baizongia pistaciae
Length = 1111
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +2
Query: 59 VLVSNAKINWV---YDGRRYKIETCTNGNFNVYKVYV 160
+L++ + INW+ YD + K T TN N N YK+++
Sbjct: 1021 ILLTKSGINWINAIYDKKNNKFYTNTNKNLNAYKIFL 1057
>UniRef50_UPI00015BD08F Cluster: UPI00015BD08F related cluster; n=1;
unknown|Rep: UPI00015BD08F UniRef100 entry - unknown
Length = 1470
Score = 33.1 bits (72), Expect = 6.1
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 170 QIKNQKIEKLDA-SMVVNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEW- 343
+I +KIE + S + +G M+K+ I G K+ G HG KGV + + +
Sbjct: 1132 KIYEEKIENVGKQSDLPSGVITMVKVYIAQKRKIRVGDKMAGRHGNKGVISVVLPVEDMP 1191
Query: 344 MAEDGTHAQICLSPVSFLSRQS 409
DGT + L+P+ SR +
Sbjct: 1192 FLPDGTPVDVVLNPLGVPSRMN 1213
>UniRef50_Q636U4 Cluster: Possible esterase; n=10; Bacillus cereus
group|Rep: Possible esterase - Bacillus cereus (strain
ZK / E33L)
Length = 275
Score = 33.1 bits (72), Expect = 6.1
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -3
Query: 445 AHHIFALNFIKIRLARQKRDGRQAYLGVRTIFGHPLGQVFAAVKHTFLTVNA--TYFYS 275
AHH F FI+ L Q + G +T+FGH LG +F A+ F +NA YF S
Sbjct: 125 AHHFFT--FIEEELKPQIEKNFEIDKGKQTLFGHSLGGLF-ALHILFTNINAFQNYFIS 180
>UniRef50_Q8GQK6 Cluster: Putative uncharacterized protein; n=1;
Empedobacter brevis|Rep: Putative uncharacterized
protein - Empedobacter brevis
Length = 229
Score = 33.1 bits (72), Expect = 6.1
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 41 VLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYK-VYVYFRQIKNQKIEKLDASMVV 217
+++ G+++ + + W+ ++ K N +FN Y + + +I Q+IEK D+
Sbjct: 68 IIFFGGIMIISLRTLWIIYFKKLKFYYFENDSFNFYNPLNSRYIKIPIQEIEKFDSINYF 127
Query: 218 NGDNVML 238
N D +++
Sbjct: 128 NNDFILI 134
>UniRef50_A0THT4 Cluster: Putative uncharacterized protein; n=1;
Burkholderia ambifaria MC40-6|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 194
Score = 33.1 bits (72), Expect = 6.1
Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 267 IWKE*KYVAFT-VRKVCLTAAKT*PSGWP-KMVRTPK-YACRPSRFCLASLILIKLSANM 437
IW+E KY AF + K + T W + R PK Y R R CL LILI S +
Sbjct: 63 IWREGKYAAFIRLAKETVRKLMTDAGLWVLRRQRPPKLYQPRARRACLGKLILIDGSDHR 122
Query: 438 WCAVEITTTRTP 473
W E T TP
Sbjct: 123 WFE-EPTPACTP 133
>UniRef50_Q9LQC3 Cluster: F28C11.19; n=33; Arabidopsis thaliana|Rep:
F28C11.19 - Arabidopsis thaliana (Mouse-ear cress)
Length = 3134
Score = 33.1 bits (72), Expect = 6.1
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 14 NYVALDDGLVLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYKVYVYFRQIKNQKIE 193
N A+++ L + VS AKIN Y ++ K G++ V +YV F ++ NQK
Sbjct: 2051 NINAVENEKDLRVRSFSVSFAKINGKYKKQKMKFMKVFEGSYKVEPIYVDFERLCNQKEP 2110
Query: 194 K 196
K
Sbjct: 2111 K 2111
>UniRef50_A4QSB0 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1004
Score = 33.1 bits (72), Expect = 6.1
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2
Query: 407 TGETKTRRATSIFGRAYHLRPSTRSGLRRR*THLSDRECHIF 282
T K + + GRA LRPST +G +R T+LS E +F
Sbjct: 795 TAGQKAKVEVHVHGRAAALRPSTSAGEKRTSTYLSPNEGQVF 836
>UniRef50_UPI0000E4A9B9 Cluster: PREDICTED: similar to KIAA1109
protein; n=4; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to KIAA1109 protein -
Strongylocentrotus purpuratus
Length = 4686
Score = 32.7 bits (71), Expect = 8.0
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +3
Query: 384 PSRFCLASLILIKLSANMWCAVEITTTRTPSVIPSSTYHTCYLIIHPTIFSKNLLKQ--- 554
P + L+L+ ++ + A ITT++ P+ + SS +H+C + ++F + LL +
Sbjct: 1325 PVNVLMTPLLLVAINRYVDAAKAITTSQHPATLLSSLHHSCIADVE-SLFLRGLLPEGGS 1383
Query: 555 -TTLDTKKSKALASIN 599
++L ++ +A A+ N
Sbjct: 1384 SSSLSRQQQQASANFN 1399
>UniRef50_Q4Q6P8 Cluster: DNA-directed RNA polymerase II subunit 2,
putative; n=5; Trypanosomatidae|Rep: DNA-directed RNA
polymerase II subunit 2, putative - Leishmania major
Length = 1185
Score = 32.7 bits (71), Expect = 8.0
Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Frame = +2
Query: 14 NYVALD-DGLVLYMAGVLVSNAKINWVYDGRRYKIETCTNGNFNVYK--VYVYFRQIKNQ 184
+Y LD DGL+ VL + + +E T GN + K + R +
Sbjct: 854 DYSKLDTDGLIKPGMRVLGGDVVVGKTIPLPEADLEKLTTGNTKITKRDASITSRTTEKG 913
Query: 185 KIEKLDASMVVNGDNVMLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEWMA--EDG 358
++K+ +M N ++ K+ I T G K C HGQKG NG + E M DG
Sbjct: 914 VVDKVMLTM--NNNDRFTKVKIRTIKIPNIGDKFCSRHGQKGT-NGIQFRQEDMPFNRDG 970
Query: 359 THAQICLSPVSFLSRQSNFDKIE 427
+ ++P + SR + IE
Sbjct: 971 IVPDLIINPHAIPSRMTVAHLIE 993
>UniRef50_A2EFT7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 923
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 251 VTSTNDLEGIKICGIHGQKGVFNGGEDLTEWMAEDGTHAQICLSPVSFLSRQSN 412
V TN GIK CG + +FNG ++ + + GT+ ++ ++ +F N
Sbjct: 20 VVQTNPFTGIKECGFFNYRYIFNGKSEILTY-NDFGTYVKLIVNGTAFYPANQN 72
>UniRef50_P75254 Cluster: UPF0134 protein MPN524; n=3; Mycoplasma
pneumoniae|Rep: UPF0134 protein MPN524 - Mycoplasma
pneumoniae
Length = 168
Score = 32.7 bits (71), Expect = 8.0
Identities = 9/53 (16%), Positives = 29/53 (54%)
Frame = +2
Query: 86 WVYDGRRYKIETCTNGNFNVYKVYVYFRQIKNQKIEKLDASMVVNGDNVMLKI 244
W Y+ R+YK++ + + + ++ NQ++ K++ ++ G+ + +++
Sbjct: 37 WTYELRKYKLKPPVKVKYVTQEQFQEYKDSNNQRLIKIETTLAAQGEQIRIQV 89
>UniRef50_Q8EWX1 Cluster: DNA-directed RNA polymerase subunit beta;
n=42; Firmicutes|Rep: DNA-directed RNA polymerase subunit
beta - Mycoplasma penetrans
Length = 1375
Score = 32.7 bits (71), Expect = 8.0
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 194 KLDASMVVNGDNV-MLKIVIVTSTNDLEGIKICGIHGQKGVFNGGEDLTEW-MAEDGTHA 367
K++ +N D + +K+ +V G K+ G HG KG+ + + + EDGT
Sbjct: 1001 KVEDDYELNADVIEQIKVYVVQKRKIQIGDKMAGRHGNKGIISKIVPVEDMPHLEDGTTI 1060
Query: 368 QICLSPVSFLSRQS 409
I L+P+ SR +
Sbjct: 1061 DIMLNPLGVPSRMN 1074
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,260,632
Number of Sequences: 1657284
Number of extensions: 13594745
Number of successful extensions: 41341
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 39816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41310
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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