Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30d11
         (444 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   1.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   1.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   5.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   5.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.2  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 349 RILNTLKAISILSGDTRGDL 408
           +ILN LK I++    T GDL
Sbjct: 319 KILNVLKKIALRRQTTNGDL 338


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 349 RILNTLKAISILSGDTRGDL 408
           +ILN LK I++    T GDL
Sbjct: 245 KILNVLKKIALRRQTTNGDL 264


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 304 LPIVLPFHQRGSDRPLED 251
           LP  +P + R  D PLED
Sbjct: 397 LPGYVPVYIRPGDTPLED 414


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 304 LPIVLPFHQRGSDRPLED 251
           LP  +P + R  D PLED
Sbjct: 222 LPGYVPVYIRPGDTPLED 239


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +1

Query: 301 GELKSYWTQLEDPLDERILNTLKAISILSGDTRGDLS 411
           GE+  ++TQ  +      +  L+   +L G    D+S
Sbjct: 323 GEVAFFFTQFSEGFSTHQIQVLEIKPVLGGTALPDIS 359


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +1

Query: 301 GELKSYWTQLEDPLDERILNTLKAISILSGDTRGDLS 411
           GE+  ++TQ  +      +  L+   +L G    D+S
Sbjct: 323 GEVAFFFTQFSEGFSTHQIQVLEIKPVLGGTALPDIS 359


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +1

Query: 301 GELKSYWTQLEDPLDERILNTLKAISILSGDTRGDLS 411
           GE+  ++TQ  +      +  L+   +L G    D+S
Sbjct: 323 GEVAFFFTQFSEGFSTHQIQVLEIKPVLGGTALPDIS 359


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +1

Query: 301 GELKSYWTQLEDPLDERILNTLKAISILSGDTRGDLS 411
           GE+  ++TQ  +      +  L+   +L G    D+S
Sbjct: 323 GEVAFFFTQFSEGFSTHQIQVLEIKPVLGGTALPDIS 359


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -2

Query: 215 SPTPVRTSLVNPISDRSMVS 156
           SP P   S   PIS   M S
Sbjct: 10  SPPPAPQSAATPISSSGMTS 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,649
Number of Sequences: 336
Number of extensions: 2067
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)