Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30d08
(416 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 56 9e-09
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 55 3e-08
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 54 6e-08
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 52 1e-07
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 44 4e-05
06_03_1255 + 28780181-28781172,28782065-28782932 42 3e-04
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 38 0.002
03_05_0865 - 28365430-28367640 37 0.006
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 36 0.017
08_01_0397 - 3509186-3510291,3510322-3512335 35 0.023
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 35 0.030
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 34 0.040
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 33 0.092
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 33 0.12
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 33 0.12
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 32 0.16
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 31 0.28
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 31 0.28
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 31 0.28
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 31 0.49
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 29 1.1
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 29 1.5
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 29 1.5
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 29 2.0
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 29 2.0
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 29 2.0
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 28 3.5
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 27 4.6
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 27 4.6
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 27 4.6
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 27 4.6
05_01_0147 - 981697-983739 27 4.6
02_01_0542 + 3971675-3971845,3973791-3973865,3974129-3974608 27 4.6
01_06_1127 - 34699119-34699360,34699446-34699689,34699773-346998... 27 8.0
01_06_0966 - 33453963-33456692 27 8.0
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 56.4 bits (130), Expect = 9e-09
Identities = 26/45 (57%), Positives = 36/45 (80%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDV 160
P ++ RQT++FSATFP +IQ LA FL+NY+F+ VG V G+STD+
Sbjct: 298 PRKSVRQTMLFSATFPPEIQRLASDFLSNYIFITVGRV-GSSTDL 341
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 54.8 bits (126), Expect = 3e-08
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = -3
Query: 279 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDV 160
RQT++FSATFP++IQ +A FL NY+F+AVG V G+STD+
Sbjct: 345 RQTMLFSATFPKEIQRMASDFLENYIFLAVGRV-GSSTDL 383
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 53.6 bits (123), Expect = 6e-08
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDV 160
P + +RQT++FSATFP++IQ +A FL +Y+F+AVG V G+STD+
Sbjct: 506 PPRGERQTMLFSATFPKEIQRMASDFLADYIFLAVGRV-GSSTDL 549
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 52.4 bits (120), Expect = 1e-07
Identities = 25/45 (55%), Positives = 36/45 (80%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDV 160
P + RQT++FSATFP++IQ +A FL +Y+F+AVG V G+STD+
Sbjct: 420 PPRGVRQTMLFSATFPKEIQRMASDFLADYIFLAVGRV-GSSTDL 463
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 44.4 bits (100), Expect = 4e-05
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQI 151
++ RQTL+FSAT P ++ LA L + + V VG VG A+ D++Q+
Sbjct: 394 IRPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQV 440
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = -3
Query: 288 QTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ 154
+ +RQTL+FSAT PE IQ+ A L + V VG G A+ DV Q
Sbjct: 358 KAQRQTLLFSATMPEKIQNFAKSALVKPIIVNVGRAGAANLDVIQ 402
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/35 (45%), Positives = 27/35 (77%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVG 187
+Q KRQTLMF+AT+P++++ +A L+N + V +G
Sbjct: 354 VQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIG 388
>03_05_0865 - 28365430-28367640
Length = 736
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 279 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ 154
R T MFSAT P ++ LA ++L N + V +G G A+ + Q
Sbjct: 514 RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQ 555
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 35.5 bits (78), Expect = 0.017
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -3
Query: 282 KRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG 178
KRQTLMFSAT P IQ L ++L N V + +VG
Sbjct: 274 KRQTLMFSATMPTWIQRLTQKYLKNP--VTIDLVG 306
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 35.1 bits (77), Expect = 0.023
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = -3
Query: 279 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVSFSN 127
RQT++FSATFP ++ LA + L + + VG + D+ Q+ +EV N
Sbjct: 606 RQTVLFSATFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQL-VEVRPEN 655
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 34.7 bits (76), Expect = 0.030
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEV 139
++ RQTL +SAT+P +++ LA +FL N V +G A+ ++QI IEV
Sbjct: 334 IRPDRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQI-IEV 384
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 34.3 bits (75), Expect = 0.040
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = -3
Query: 324 F*EN*NCALYPLQTKRQTLMFSATFPEDIQHLAGRFLNNYLFV 196
F E+ L L +RQ+++FSAT P ++ L+ R+LNN L +
Sbjct: 295 FEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTI 337
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 33.1 bits (72), Expect = 0.092
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = -3
Query: 279 RQTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVG-GASTDVEQIFIEV 139
RQT+MFSAT+P + LA F++ N + V +G A+ DV QI +EV
Sbjct: 273 RQTVMFSATWPPAVHQLAQEFMDPNPIKVVIGSEDLAANHDVMQI-VEV 320
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 32.7 bits (71), Expect = 0.12
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = -3
Query: 279 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIV 181
RQTLM++AT+P+++ +AG L + + V +G +
Sbjct: 782 RQTLMYTATWPKEVTKIAGDLLKDPVQVNIGSI 814
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 32.7 bits (71), Expect = 0.12
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = -3
Query: 279 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVSFSN 127
RQT++FSA FP ++ LA + L + + VG + D+ Q+ +EV N
Sbjct: 467 RQTVLFSAIFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQL-VEVRPEN 516
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 32.3 bits (70), Expect = 0.16
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -3
Query: 285 TKRQTLMFSATFPEDIQHLAGRFLNN 208
TK QTL+FSAT PE ++ L+ RFL +
Sbjct: 288 TKVQTLLFSATIPEWVKKLSLRFLKS 313
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 31.5 bits (68), Expect = 0.28
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 282 KRQTLMFSATFPEDIQHLAG-RFLNNYLFVAVGIVGGASTDVEQIFIEVSFSNLTQPYHF 106
+RQTL+FSAT PE+++ ++ NY F+ G T + + F HF
Sbjct: 200 ERQTLLFSATVPEEVRQISHIAMKKNYKFINTVKDGDEETHAQ---VSQMFMIAPLDLHF 256
Query: 105 SIV 97
SI+
Sbjct: 257 SIL 259
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 31.5 bits (68), Expect = 0.28
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = -3
Query: 282 KRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIV 181
+RQTLM++AT+P++++ +A L + + V +G V
Sbjct: 327 RRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSV 360
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 31.5 bits (68), Expect = 0.28
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVG 187
++ RQTL +SAT+P++++ LA FL + V +G
Sbjct: 240 IRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIG 274
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 30.7 bits (66), Expect = 0.49
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQI 151
L +RQTL+FSAT P++++ ++ L +++FV +G T + I
Sbjct: 525 LPRQRQTLLFSATIPKEVRRVSQLVLKRDHVFVDTVGLGAVETPTKVI 572
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 300 LYPLQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIF 148
L+ L RQTL+FSAT P+ + A L + V + + S D++ F
Sbjct: 196 LHKLSDTRQTLLFSATLPQALADFAKAGLRDPQIVRLDLDKKISPDLKLAF 246
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -3
Query: 267 MFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFI 145
+FSAT P+ I+ LA +++ + V VG AS+ ++Q I
Sbjct: 324 LFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIKQKLI 364
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 29.1 bits (62), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHLAGRFL 214
L + RQ LMFSATFP ++ ++L
Sbjct: 294 LPSNRQILMFSATFPVTVKEFKDKYL 319
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHLAGRFL 214
L RQ LMFSATFP ++ ++L
Sbjct: 304 LPASRQILMFSATFPVTVKEFKDKYL 329
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = -3
Query: 276 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVSFSNLTQPYHFSIV 97
Q +MFSAT +++ ++ N + ++ G + V+Q+ I V Q F I+
Sbjct: 363 QVMMFSATVNSEVEKMSNSLAKNAIHISCGNPSRPNKSVKQVVIWVESKQKKQKI-FEIM 421
Query: 96 T 94
T
Sbjct: 422 T 422
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = -3
Query: 282 KRQTLMFSATFPEDIQHLA 226
+RQTL+FSAT PE+++ ++
Sbjct: 254 ERQTLLFSATVPEEVRQIS 272
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHLAGRFL 214
L RQ LMFSATFP ++ ++L
Sbjct: 317 LPANRQLLMFSATFPVTVKDFKEKYL 342
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 282 KRQTLMFSATFPEDIQHLAGRFLN 211
+RQT++FSAT E+I L LN
Sbjct: 371 RRQTMLFSATMTEEINELVTLSLN 394
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 27.5 bits (58), Expect = 4.6
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHLAGRFLNN-YLFVAVGIVGGASTDVEQIFIEV 139
L KRQT +FSAT ++++ L NN Y F A T ++Q++I V
Sbjct: 250 LPKKRQTFLFSATISDNLRSLLELSGNNSYFFEAYEGFKTVDT-LKQLYIHV 300
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 27.5 bits (58), Expect = 4.6
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -3
Query: 354 FVIIQEE----IIYF*EN*NCALYPLQTKRQTLMFSATFPEDIQHLAGRFLNNYLFV 196
FV++ E + F E+ + L RQ+++FSAT P I+ + ++L + + +
Sbjct: 241 FVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRKITSKYLKDPIII 297
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHL 229
L +RQTL+FSAT P++++ +
Sbjct: 638 LPKQRQTLLFSATVPDEVRQV 658
>05_01_0147 - 981697-983739
Length = 680
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 300 LYPLQTKRQTLMFSATF 250
LYP+ T R+TLMF+A F
Sbjct: 126 LYPMLTVRETLMFAAEF 142
>02_01_0542 + 3971675-3971845,3973791-3973865,3974129-3974608
Length = 241
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 1 GCKIHQRLHKIRKNLFI*MCLTLLKPTYCA*CH 99
GC H+ K KN+F C T + P +CA H
Sbjct: 19 GCPAHESRKKNEKNIFCLACCTSICP-HCAPSH 50
>01_06_1127 - 34699119-34699360,34699446-34699689,34699773-34699844,
34700123-34700218,34700322-34700438,34700520-34700676,
34700770-34700867,34700940-34701098,34701169-34701339,
34701402-34701479,34701548-34701667,34701968-34702085,
34702216-34702346,34702452-34702528,34702858-34702969,
34703057-34703239,34703416-34703517,34703617-34703718,
34703817-34703912,34704481-34704558,34704652-34704744,
34704817-34704938,34705035-34705116,34705204-34705278,
34705385-34705645,34705730-34705854,34705956-34706031,
34706128-34706277,34706359-34706454,34706707-34706814,
34706956-34707056,34707727-34707814,34707894-34708006,
34708278-34708383,34709143-34709247,34709356-34709427,
34709931-34709971,34710067-34710175,34710252-34710317,
34710404-34710540,34710788-34710890,34711416-34711535,
34711707-34711820,34711923-34712008,34712088-34712170,
34713283-34713347,34713444-34713621,34713697-34713776,
34714926-34715049,34715140-34715245,34715399-34715561
Length = 1966
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 201 IDNYLRNDQPNVGCLQGMLPKTLKFAFSSA 290
+D+ ++ V CL M+PKT F+ S A
Sbjct: 1472 LDDLIKEADRLVSCLAVMVPKTFNFSLSGA 1501
>01_06_0966 - 33453963-33456692
Length = 909
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 257 AENIKVCLFVCSGYKAQF*FS*KYIISSCI 346
++ +++CL CS + +F S ++II CI
Sbjct: 394 SDKLRLCLLYCSLFPEEFSISKEWIIGYCI 423
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,000,177
Number of Sequences: 37544
Number of extensions: 173210
Number of successful extensions: 389
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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