Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30d08
         (416 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    72   1e-14
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    27   0.27 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   1.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   7.8  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 71.7 bits (168), Expect = 1e-14
 Identities = 34/50 (68%), Positives = 40/50 (80%)
 Frame = -3

Query: 303 ALYPLQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ 154
           A  P + +RQTLMFSATFP +IQ LAG+FL+NY+ V VGIVGGA  DVEQ
Sbjct: 351 ATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFVGIVGGACADVEQ 400


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 27.1 bits (57), Expect = 0.27
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = -3

Query: 255 TFPEDIQHLAGRFLNNY---LFVAVGIVGGASTDVEQIFIEVSFSNLTQPYHFSIVTLCT 85
           T  E +  L G FLN Y   L V VG +G   + +  +F       L+  Y+ + + +  
Sbjct: 28  TETEVVMELIGNFLNFYYMPLLVVVGSIGNILSVL--VFFNTKLKKLSSSYYLAALGISD 85

Query: 84  IC 79
            C
Sbjct: 86  TC 87


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 326  YIISSCIITKLFTCLCGFI 382
            Y++   +   L+TC CGF+
Sbjct: 948  YLVEIALANNLWTCDCGFV 966


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +2

Query: 212  FKKRPAKCWMSSGNVAENIKVCLFV-CSG 295
            F      CW+   N  +NI+  L V C+G
Sbjct: 1382 FSSLIVSCWLRGSNKQQNIENALSVNCNG 1410


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +2

Query: 212  FKKRPAKCWMSSGNVAENIKVCLFV-CSG 295
            F      CW+   N  +NI+  L V C+G
Sbjct: 1383 FSSLIVSCWLRGSNKQQNIENALSVNCNG 1411


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 197  WRLVSSEALVLTSNKSSLKSVFLI*PNHITFQL*HYAQYVGFSNV 63
            WR  +    ++T+ K  +  +  I  N +T  L HY Q   FS V
Sbjct: 1610 WRPQAIVFEIVTNKKFDMIIMLFIGFNMLTMTLDHYKQSETFSAV 1654


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,245
Number of Sequences: 2352
Number of extensions: 7445
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)