Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30d08
(416 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 56 1e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 56 1e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 56 1e-08
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 52 2e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 48 3e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 48 3e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 48 3e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 43 1e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 43 1e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 43 1e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 42 1e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 42 1e-04
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 39 0.002
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 36 0.009
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 35 0.027
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 33 0.11
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 31 0.44
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 31 0.44
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 30 0.59
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 30 0.78
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 30 0.78
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 29 1.8
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 28 2.4
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 28 2.4
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 28 2.4
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 28 3.1
AY519854-1|AAR89635.1| 229|Caenorhabditis elegans arsenite indu... 28 3.1
Z81119-4|CAB03335.2| 389|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z50797-4|CAA90674.1| 339|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical pr... 27 5.5
U41016-4|AAP46275.1| 809|Caenorhabditis elegans Hypothetical pr... 27 5.5
U41016-2|AAM51496.1| 899|Caenorhabditis elegans Hypothetical pr... 27 5.5
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 27 5.5
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 27 5.5
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 26 9.5
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 55.6 bits (128), Expect = 1e-08
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIFIEVS 136
P +T R T MFSATFP++IQ LA FL +NY+F+AVG VG S ++EQ + V+
Sbjct: 327 PPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVN 380
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 55.6 bits (128), Expect = 1e-08
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIFIEVS 136
P +T R T MFSATFP++IQ LA FL +NY+F+AVG VG S ++EQ + V+
Sbjct: 311 PPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVN 364
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 55.6 bits (128), Expect = 1e-08
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIFIEVS 136
P +T R T MFSATFP++IQ LA FL +NY+F+AVG VG S ++EQ + V+
Sbjct: 308 PPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVN 361
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 51.6 bits (118), Expect = 2e-07
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = -3
Query: 306 CALYPLQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIFIEV 139
C P + +R T MFSATFP++IQ LA FL NY+F+AVG VG S ++ Q + V
Sbjct: 352 CNRMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVGSTSENIMQKIVWV 408
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 48.0 bits (109), Expect = 3e-06
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIF 148
P + RQTLMFSATFP+ +Q A FL NY+ +A+ +G A+ V Q F
Sbjct: 524 PRKENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQEF 573
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 48.0 bits (109), Expect = 3e-06
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIF 148
P + RQTLMFSATFP+ +Q A FL NY+ +A+ +G A+ V Q F
Sbjct: 524 PRKENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQEF 573
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 48.0 bits (109), Expect = 3e-06
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIF 148
P + RQTLMFSATFP+ +Q A FL NY+ +A+ +G A+ V Q F
Sbjct: 524 PRKENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQEF 573
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIF 148
P + RQTLMFSATFP+ +Q A L Y+ +A+ +G A+ V Q F
Sbjct: 735 PKKENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANKCVLQEF 784
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIF 148
P + RQTLMFSATFP+ +Q A L Y+ +A+ +G A+ V Q F
Sbjct: 735 PKKENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANKCVLQEF 784
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIF 148
P + RQTLMFSATFP+ +Q A L Y+ +A+ +G A+ V Q F
Sbjct: 735 PKKENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANKCVLQEF 784
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIF 148
P KRQT+MFSATFP +Q A + L +Y + + +G A+ V Q F
Sbjct: 481 PKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIGAANKCVIQEF 530
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIF 148
P KRQT+MFSATFP +Q A + L +Y + + +G A+ V Q F
Sbjct: 481 PKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIGAANKCVIQEF 530
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/48 (45%), Positives = 27/48 (56%)
Frame = -3
Query: 297 YPLQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ 154
Y + +RQTL+FSAT P IQ A L + V VG G AS +V Q
Sbjct: 372 YFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAGAASLNVLQ 419
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -3
Query: 279 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ-IFI 145
RQ LMFSATF + ++ LA L + + + G VG A+ D+EQ +F+
Sbjct: 445 RQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANADIEQKVFV 490
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 36.3 bits (80), Expect = 0.009
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVG 187
++ RQTLMFSAT+P++++ LA F + F+ VG
Sbjct: 304 IRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVG 338
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 34.7 bits (76), Expect = 0.027
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -3
Query: 279 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQI 151
RQT+MF+AT I+ LA ++L V +G G + VEQ+
Sbjct: 509 RQTVMFTATMSSAIERLARQYLRRPAVVHIGSAGKPTERVEQV 551
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 32.7 bits (71), Expect = 0.11
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ 154
++ +QT++FSATFP ++ LA + L+ + + VG +D+ Q
Sbjct: 482 IRPDKQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCSDITQ 527
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 30.7 bits (66), Expect = 0.44
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -3
Query: 366 HVNSFVIIQEEIIY---F*EN*NCALYPLQTKRQTLMFSATFPEDIQHLAGRFLNNYLFV 196
HV+ FV+ + + + F ++ N + L RQ +FSAT+P ++ +L FL + V
Sbjct: 164 HVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFLRDAALV 223
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 30.7 bits (66), Expect = 0.44
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -3
Query: 366 HVNSFVIIQEEIIY---F*EN*NCALYPLQTKRQTLMFSATFPEDIQHLAGRFLNNYLFV 196
HV+ FV+ + + + F ++ N + L RQ +FSAT+P ++ +L FL + V
Sbjct: 164 HVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFLRDAALV 223
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 30.3 bits (65), Expect = 0.59
Identities = 10/30 (33%), Positives = 22/30 (73%)
Frame = -3
Query: 282 KRQTLMFSATFPEDIQHLAGRFLNNYLFVA 193
++Q +MFSAT P++++ + RF+ + F++
Sbjct: 217 QKQVMMFSATLPKELRTVCKRFMQDVRFIS 246
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 29.9 bits (64), Expect = 0.78
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 279 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEV 139
RQTL+FSAT E+I LA L + + + + + Q FI +
Sbjct: 350 RQTLLFSATMTEEIDELASMSLQKPVKIFINENTDTALKLRQEFIRI 396
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 29.9 bits (64), Expect = 0.78
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -3
Query: 309 NCALYPLQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGAST 166
N + L +RQTL+FSAT +++ L N+ +FV+V A+T
Sbjct: 244 NSIINNLPAERQTLLFSATQTRNVKDLCRVCTNDPVFVSVHENASAAT 291
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -3
Query: 291 LQTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAV 190
+Q +Q +MFSAT P++++ + RF+ + + V V
Sbjct: 206 VQEIKQVMMFSATLPKELRTVCKRFMQDPMEVYV 239
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = -3
Query: 282 KRQTLMFSATFPEDIQHLAGRFLNNYLFVAV 190
++Q +MFSAT P++++ + RF+ + + V V
Sbjct: 217 QKQVMMFSATLPKELRTVCKRFMQDPMEVYV 247
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQ--HLAGRFLNNYLFVAVGIVGGASTDVEQIFIEV 139
P + +QT++FSA+F ED+Q L Y + V G A+ ++Q + V
Sbjct: 919 PGERTQQTVLFSASFSEDLQSDDLPKFVKEGYTMLQVDKFGTANEKIDQKILPV 972
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 294 PLQTKRQTLMFSATFPEDIQ--HLAGRFLNNYLFVAVGIVGGASTDVEQIFIEV 139
P + +QT++FSA+F ED+Q L Y + V G A+ ++Q + V
Sbjct: 919 PGERTQQTVLFSASFSEDLQSDDLPKFVKEGYTMLQVDKFGTANEKIDQKILPV 972
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/45 (24%), Positives = 27/45 (60%)
Frame = -3
Query: 276 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIE 142
Q+++FSAT+ E + + A + + N + V + A +++Q +++
Sbjct: 391 QSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQ 435
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/45 (24%), Positives = 27/45 (60%)
Frame = -3
Query: 276 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIE 142
Q+++FSAT+ E + + A + + N + V + A +++Q +++
Sbjct: 416 QSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQ 460
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/45 (24%), Positives = 27/45 (60%)
Frame = -3
Query: 276 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIE 142
Q+++FSAT+ E + + A + + N + V + A +++Q +++
Sbjct: 800 QSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQ 844
>AY519854-1|AAR89635.1| 229|Caenorhabditis elegans arsenite
inducible RNA associatedprotein (aip-1) protein.
Length = 229
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 301 STILIFLEIYNFFLYYYKTIYMFMWFYKNWVKEC 402
S+ L+F +Y+ Y Y+ +Y M + N K C
Sbjct: 5 SSFLVFKSLYSLVSYQYRLLYSAMAEFPNLGKHC 38
>Z81119-4|CAB03335.2| 389|Caenorhabditis elegans Hypothetical
protein T10H4.5 protein.
Length = 389
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 301 STILIFLEIYNFFLYYYKTIYM---FMWFYKNWVKECVEKK 414
+ ILI L ++ F++ YY + Y F W+ +K C K
Sbjct: 162 TAILIVLIMFTFWILYYSSPYFEMEFRWYPDILIKSCYNYK 202
>Z50797-4|CAA90674.1| 339|Caenorhabditis elegans Hypothetical
protein T22H6.3 protein.
Length = 339
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2
Query: 337 RNYIFLRKLKLCFISTADE 281
RNY+F + LKL ISTA E
Sbjct: 309 RNYVFCKSLKLSRISTATE 327
>Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical protein
K12D12.2 protein.
Length = 1696
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 221 RPAKCWMSSGNVAENIKVCLFVCS 292
+P C+M S N+ E + F+CS
Sbjct: 1058 KPVLCFMRSSNIIEKLTTSPFICS 1081
>U41016-4|AAP46275.1| 809|Caenorhabditis elegans Hypothetical
protein R11G1.6d protein.
Length = 809
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 213 NNYLFVAVGIVGGASTDVEQIFIEVSFS 130
N++ FVAV + GGA+ +V Q I SFS
Sbjct: 723 NDHTFVAVKVKGGATCNVCQQRIRSSFS 750
>U41016-2|AAM51496.1| 899|Caenorhabditis elegans Hypothetical
protein R11G1.6a protein.
Length = 899
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 213 NNYLFVAVGIVGGASTDVEQIFIEVSFS 130
N++ FVAV + GGA+ +V Q I SFS
Sbjct: 813 NDHTFVAVKVKGGATCNVCQQRIRSSFS 840
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 279 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIF 148
RQTL+FSAT P+ + A L + + V + + S + +F
Sbjct: 199 RQTLLFSATLPKMLVDFAKAGLTDPMLVRLDVDEKVSDKLSMVF 242
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 279 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIF 148
RQTL+FSAT P+ + A L + + V + + S + +F
Sbjct: 199 RQTLLFSATLPKMLVDFAKAGLTDPMLVRLDVDEKVSDKLSMVF 242
>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
protein T05C3.2 protein.
Length = 1733
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 185 SSEALVLTSNKSSLKSVFLI*PNHI 111
S+ L +S KSS++S FLI PNH+
Sbjct: 20 STSQLTRSSKKSSIESKFLI-PNHL 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,307,312
Number of Sequences: 27780
Number of extensions: 177502
Number of successful extensions: 493
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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