Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30d04
         (494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.50 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.0  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.5  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.1  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   6.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   6.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   6.1  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 248 IVYNLKTKTLTMYN-ERIRAALNRPARFNDQTTNVNIAY 361
           + Y +  + +  YN ER+   L R  RFND    +  AY
Sbjct: 231 LFYYMHQQIIARYNFERLCNKLKRATRFNDFNEAIKEAY 269


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +1

Query: 154 DYKCGQQHTA*QHV*NNVSKSRF*KFRLQYTDCVQFKNKNFNNVQ 288
           D KC   +T  Q   + + +S F    L +  C   + + FNN Q
Sbjct: 476 DVKCVSNYTKQQSKIHLIVRSVFVTTYLMFDYCTVLRVQRFNNYQ 520


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 241 IVVEIFKIGFLKHCSKRVVKR 179
           I+   F+ GF K C  ++VK+
Sbjct: 355 IISSKFRSGFFKLCGMKIVKK 375


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 176 CCWPHL*SIPSTLTNGALETL 114
           CCW    SIP  + N    TL
Sbjct: 13  CCWGKSLSIPQQILNEFKSTL 33


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 54  AIWRPKDFFLEKVAVS 7
           A+W P D F+ K   S
Sbjct: 103 AVWDPDDVFIRKFETS 118


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +2

Query: 341 TNVNIAYVFLFFICIVLLNVLV 406
           T++ + Y ++F++   +L VLV
Sbjct: 84  TSIPMLYAYVFYVVTTVLVVLV 105


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +2

Query: 341 TNVNIAYVFLFFICIVLLNVLV 406
           T++ + Y ++F++   +L VLV
Sbjct: 84  TSIPMLYAYVFYVVTTVLVVLV 105


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +2

Query: 341 TNVNIAYVFLFFICIVLLNVLV 406
           T++ + Y ++F++   +L VLV
Sbjct: 84  TSIPMLYAYVFYVVTTVLVVLV 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,115
Number of Sequences: 336
Number of extensions: 2673
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)