Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30d04
         (494 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3297|AAF46778.1|  297|Drosophila melanogaster CG13490-P...    29   3.5  
AE014297-2725|AAG22156.2|  980|Drosophila melanogaster CG4733-PA...    28   8.0  

>AE013599-3297|AAF46778.1|  297|Drosophila melanogaster CG13490-PA
           protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
 Frame = +2

Query: 71  WESIRWQILN-GDEIEVSPEHRSLAWRELIINVANNTPLDNTFRTMF---QKADFENFDY 238
           W S  W +++ GD + V P    +  + + ++ A +              Q+  F   DY
Sbjct: 134 WRSGDWSLMDHGDRVTVHPLDGEIYAQIINLSTAYDVYFHGAGDVPSISKQRYTFPESDY 193

Query: 239 NTPIVYNLKTKTLTMYNERIRAALNRPARFNDQTTNVNIAYVFLFFICI 385
            T  +  L+  T    NE  RA   R  RFN +   +    ++ F +C+
Sbjct: 194 TTVELIALEIFT----NEEARATKQRSCRFNYEAEEMMTVPIYSFGLCL 238


>AE014297-2725|AAG22156.2|  980|Drosophila melanogaster CG4733-PA
           protein.
          Length = 980

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -2

Query: 187 VKRCVVGHIYNQFPPR*RTVLWRHFDFVAIQYLPSYRFPHIDNNSNMATKRFFSG 23
           ++R V  H     PP+ + +L +        Y+P + FPH     N+A +R   G
Sbjct: 554 IRRQVKLHATPPPPPQEQNLLQKEIRSTKSVYIPRFYFPHGKPQPNIAMERVVRG 608


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,853,612
Number of Sequences: 53049
Number of extensions: 448108
Number of successful extensions: 1286
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)