Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30c22
         (157 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   1.9  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    19   4.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    19   4.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    19   4.5  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    19   4.5  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 1.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 59  FYSFIFTIVCNILFRNIK 112
           +Y F+   + NIL R+ K
Sbjct: 180 YYEFLLISLINILIRSFK 197


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 8   HDEQRVGGN 34
           HD QR GG+
Sbjct: 304 HDNQRTGGS 312


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 8   HDEQRVGGN 34
           HD QR GG+
Sbjct: 305 HDNQRTGGS 313


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 8   HDEQRVGGN 34
           HD QR GG+
Sbjct: 305 HDNQRTGGS 313


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 89  NILFRNIKRTTT 124
           NI +RN+  TTT
Sbjct: 119 NIKYRNLLETTT 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,405
Number of Sequences: 336
Number of extensions: 252
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 32
effective length of database: 111,833
effective search space used:  2124827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)