Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30c21
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.23 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.7  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   8.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 179  DPYIVENKSQELSATFRGHPLDGTQMTFPEGYRAVLVTETKRP 307
            DP  +++  Q  S++  G PL GT +  P G      T +K P
Sbjct: 1086 DPVALKSAQQGSSSSSEGVPLKGTAVPPPSGSSGPGSTGSKSP 1128


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 49  QLNCEILIFCYCF 11
           Q N  +  FCYC+
Sbjct: 545 QFNTIVFAFCYCY 557



 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 49  QLNCEILIFCYCF 11
           Q N  +  FCYC+
Sbjct: 264 QFNTIVFSFCYCY 276


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 416 WLYINHRSSMV 384
           WLY+N+  S+V
Sbjct: 425 WLYLNNEGSLV 435


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 509 GFNKCQFNRKKSNKI 465
           G+ +C  NRK  NK+
Sbjct: 173 GYKQCVENRKWQNKV 187


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 509 GFNKCQFNRKKSNKI 465
           G+ +C  NRK  NK+
Sbjct: 406 GYKQCVENRKWQNKV 420


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 509 GFNKCQFNRKKSNKI 465
           G+ +C  NRK  NK+
Sbjct: 406 GYKQCVENRKWQNKV 420


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,206
Number of Sequences: 336
Number of extensions: 2059
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)