Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30c21
         (519 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001550-1|AAN71305.1|  165|Drosophila melanogaster RE11282p pro...   105   5e-23
AE013599-2519|AAM68481.1|  155|Drosophila melanogaster CG30105-P...   104   8e-23
AY058279-1|AAL13508.1| 1148|Drosophila melanogaster GH03118p pro...    30   1.6  
AE013599-3458|AAF46895.4| 2964|Drosophila melanogaster CG30092-P...    30   1.6  

>BT001550-1|AAN71305.1|  165|Drosophila melanogaster RE11282p
           protein.
          Length = 165

 Score =  105 bits (251), Expect = 5e-23
 Identities = 53/138 (38%), Positives = 86/138 (62%), Gaps = 6/138 (4%)
 Frame = +2

Query: 50  IKMSILVE---NNLIKNENEDIFEQKSHYIPCKIEQDGSANVKKYFDPYI---VENKSQE 211
           + MSI ++    N  K +N D+     HY+P KI+ DG ANVK YF+ Y     E  +  
Sbjct: 9   VTMSITLDFNGKNFAKGKNLDV-----HYLPAKIDGDGEANVKNYFNNYTREATEFGTGI 63

Query: 212 LSATFRGHPLDGTQMTFPEGYRAVLVTETKRPLTEDAERKFQVTGGFKNFTYWNWDKKPS 391
           L+   RG PL G ++  PEGY  +++ ET++P+++ ++RK ++TG F++FTYWN+DK PS
Sbjct: 64  LTNALRGFPLMGEKLKVPEGYCGLVLQETEKPISDTSDRKLRLTGVFQDFTYWNYDKVPS 123

Query: 392 KNDDLCKAMDWIEIAEAI 445
             D   +A+   ++A+A+
Sbjct: 124 NGDPYRQALPLPDVAQAL 141


>AE013599-2519|AAM68481.1|  155|Drosophila melanogaster CG30105-PA
           protein.
          Length = 155

 Score =  104 bits (249), Expect = 8e-23
 Identities = 50/126 (39%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
 Frame = +2

Query: 77  NLIKNENEDIFEQKSHYIPCKIEQDGSANVKKYFDPYI---VENKSQELSATFRGHPLDG 247
           N  K +N D+     HY+P KI+ DG ANVK YF+ Y     E  +  L+   RG PL G
Sbjct: 11  NFAKGKNLDV-----HYLPAKIDGDGEANVKNYFNNYTREATEFGTGILTNALRGFPLMG 65

Query: 248 TQMTFPEGYRAVLVTETKRPLTEDAERKFQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWI 427
            ++  PEGY  +++ ET++P+++ ++RK ++TG F++FTYWN+DK PS  D   +A+   
Sbjct: 66  EKLKVPEGYCGLVLQETEKPISDTSDRKLRLTGVFQDFTYWNYDKVPSNGDPYRQALPLP 125

Query: 428 EIAEAI 445
           ++A+A+
Sbjct: 126 DVAQAL 131


>AY058279-1|AAL13508.1| 1148|Drosophila melanogaster GH03118p
           protein.
          Length = 1148

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 128 IPCKIEQDGSANVKKYFDPYIVENKSQELSATFRGHPLDGT 250
           +P  ++ +G+A  K  F P   E  +  LS  F GHP+ G+
Sbjct: 72  VPNFVQSEGNARFKVNFKP--TEAATHSLSVRFNGHPVPGS 110


>AE013599-3458|AAF46895.4| 2964|Drosophila melanogaster CG30092-PD,
            isoform D protein.
          Length = 2964

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 128  IPCKIEQDGSANVKKYFDPYIVENKSQELSATFRGHPLDGT 250
            +P  ++ +G+A  K  F P   E  +  LS  F GHP+ G+
Sbjct: 1888 VPNFVQSEGNARFKVNFKP--TEAATHSLSVRFNGHPVPGS 1926


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,703,669
Number of Sequences: 53049
Number of extensions: 363832
Number of successful extensions: 983
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)