BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30c19
(516 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 1.2
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 2.1
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 2.8
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 2.8
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 2.8
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 2.8
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 2.8
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 22 2.8
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 22 2.8
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 22 2.8
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 21 4.9
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 4.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 4.9
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 4.9
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 4.9
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 21 4.9
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 21 4.9
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 21 4.9
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 21 4.9
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 21 4.9
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 21 4.9
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 21 4.9
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 21 4.9
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 21 4.9
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 21 4.9
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 4.9
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 4.9
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 6.5
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 8.6
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 8.6
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 21 8.6
DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory pro... 21 8.6
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 8.6
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 21 8.6
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.4 bits (48), Expect = 1.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 131 FLFHIILCLLLYVGIGDVAAFPVQP 205
FLFHI++ + L + +G A P P
Sbjct: 673 FLFHIVIGMNLVLQVGTHADLPPVP 697
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +3
Query: 126 YHFYFISFYVSCCMLALVMWPLFL 197
Y+FY++ C + M LFL
Sbjct: 259 YYFYYMHLLFCCAFIIFTMHLLFL 282
Score = 20.6 bits (41), Expect = 8.6
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = +2
Query: 194 PVQPKKCKEYQVGSENTKTRNKDNELEMG 280
PV+ +KC V + K + L++G
Sbjct: 13 PVKKRKCTVSNVSLHSLKNKRSGASLQVG 41
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.2 bits (45), Expect = 2.8
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = +3
Query: 132 FYFISFYVSCCMLALVMWPLFLFSPKNVRNTKWAAKILKHVTKIMNL 272
+YF + V C +++ + F P + IL +T +NL
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNL 259
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.2 bits (45), Expect = 2.8
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = +3
Query: 132 FYFISFYVSCCMLALVMWPLFLFSPKNVRNTKWAAKILKHVTKIMNL 272
+YF + V C +++ + F P + IL +T +NL
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNL 259
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.2 bits (45), Expect = 2.8
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = +3
Query: 132 FYFISFYVSCCMLALVMWPLFLFSPKNVRNTKWAAKILKHVTKIMNL 272
+YF + V C +++ + F P + IL +T +NL
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNL 259
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.2 bits (45), Expect = 2.8
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = +3
Query: 132 FYFISFYVSCCMLALVMWPLFLFSPKNVRNTKWAAKILKHVTKIMNL 272
+YF + V C +++ + F P + IL +T +NL
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNL 259
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.2 bits (45), Expect = 2.8
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = +3
Query: 132 FYFISFYVSCCMLALVMWPLFLFSPKNVRNTKWAAKILKHVTKIMNL 272
+YF + V C +++ + F P + IL +T +NL
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNL 259
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 22.2 bits (45), Expect = 2.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +3
Query: 51 FMSSILFTFAYLFKKITDREPNKIKYHFYF 140
F S +LF LF + + N + +FY+
Sbjct: 295 FASDLLFILIQLFNSLRQMKNNLERIYFYW 324
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 22.2 bits (45), Expect = 2.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +3
Query: 51 FMSSILFTFAYLFKKITDREPNKIKYHFYF 140
F S +LF LF + + N + +FY+
Sbjct: 295 FASDLLFILIQLFNSLRQMKNNLERIYFYW 324
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 22.2 bits (45), Expect = 2.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +3
Query: 51 FMSSILFTFAYLFKKITDREPNKIKYHFYF 140
F S +LF LF + + N + +FY+
Sbjct: 295 FASDLLFILIQLFNSLRQMKNNLERIYFYW 324
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 21.4 bits (43), Expect = 4.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 357 KHPMCTDD 334
KHP+C DD
Sbjct: 152 KHPLCNDD 159
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 263 YLCYVF*YFRCPLGIPYIFWA 201
Y+CY F F C + I + +A
Sbjct: 143 YICYAFGKFSCKVMIQSVSFA 163
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 263 YLCYVF*YFRCPLGIPYIFWA 201
Y+CY F F C + I + +A
Sbjct: 376 YICYAFGKFSCKVMIQSVSFA 396
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 263 YLCYVF*YFRCPLGIPYIFWA 201
Y+CY F F C + I + +A
Sbjct: 376 YICYAFGKFSCKVMIQSVSFA 396
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 4.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 197 QEKRPHHQCQH 165
Q +PHHQ QH
Sbjct: 177 QHHQPHHQQQH 187
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 271 KFIIFVTCFSIFAAHLVFLTFFGLNR 194
K +IF+ CF + A L+ F L R
Sbjct: 88 KRLIFIECFVMMALTLIVTLFTFLAR 113
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 271 KFIIFVTCFSIFAAHLVFLTFFGLNR 194
K +IF+ CF + A L+ F L R
Sbjct: 88 KRLIFIECFVMMALTLIVTLFTFLAR 113
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 206 KKCKEYQVGSENTKTRNKD 262
K KE+ G+E +NKD
Sbjct: 360 KNIKEFYYGNEEPTDKNKD 378
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 206 KKCKEYQVGSENTKTRNKD 262
K KE+ G+E +NKD
Sbjct: 360 KNIKEFYYGNEEPTDKNKD 378
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 206 KKCKEYQVGSENTKTRNKD 262
K KE+ G+E +NKD
Sbjct: 360 KNIKEFYYGNEEPTDKNKD 378
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 206 KKCKEYQVGSENTKTRNKD 262
K KE+ G+E +NKD
Sbjct: 360 KNIKEFYYGNEEPTDKNKD 378
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 206 KKCKEYQVGSENTKTRNKD 262
K KE+ G+E +NKD
Sbjct: 359 KNIKEFYYGNEEPTDKNKD 377
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 21.4 bits (43), Expect = 4.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +3
Query: 9 IEPQDELVEMWHALFMSSILFT 74
+ P+ E ++ W ++ S+ LFT
Sbjct: 493 VNPEPERMKFWADIYNSNPLFT 514
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 21.4 bits (43), Expect = 4.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +3
Query: 9 IEPQDELVEMWHALFMSSILFT 74
+ P+ E ++ W ++ S+ LFT
Sbjct: 495 VNPEPERMKFWADIYNSNPLFT 516
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 21.4 bits (43), Expect = 4.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +3
Query: 9 IEPQDELVEMWHALFMSSILFT 74
+ P+ E ++ W ++ S+ LFT
Sbjct: 493 VNPEPERMKFWTDIYNSNPLFT 514
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 21.4 bits (43), Expect = 4.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +3
Query: 9 IEPQDELVEMWHALFMSSILFT 74
+ P+ E ++ W ++ S+ LFT
Sbjct: 495 VNPEPERMKFWTDIYNSNPLFT 516
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.4 bits (43), Expect = 4.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 197 QEKRPHHQCQH 165
Q +PHHQ QH
Sbjct: 179 QHHQPHHQQQH 189
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 131 FLFHIILCLLLYVGIG 178
FLFHI++ + L + +G
Sbjct: 673 FLFHIVIGMNLIIHVG 688
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 450 YLAGVVFIDRYDPKEAYKQ 506
+++GVV ++ P E Y Q
Sbjct: 21 HISGVVVDPKFPPSEEYNQ 39
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 450 YLAGVVFIDRYDPKEAYKQ 506
+++GVV ++ P E Y Q
Sbjct: 21 HISGVVVDPKFPPSEEYNQ 39
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 20.6 bits (41), Expect = 8.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 401 DSQKRTVLRLAIWSFCLFGRSSLY 472
D+Q ++ + WS C RS+ Y
Sbjct: 356 DAQSTSLRPFSRWSLCNSARSNKY 379
>DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory
protein 7 protein.
Length = 127
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 210 NVRNTKWAAKILKHVTKIMNLKWE 281
N + + A K+++H+T+ WE
Sbjct: 78 NQKQKETAEKVIRHLTQKRARDWE 101
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 450 YLAGVVFIDRYDPKEAYKQ 506
+++GVV ++ P E Y Q
Sbjct: 21 HISGVVVDPKFPPSEEYNQ 39
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 20.6 bits (41), Expect = 8.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 450 YLAGVVFIDRYDPKEAYKQ 506
+++GVV ++ P E Y Q
Sbjct: 21 HISGVVVDPKFPPSEEYNQ 39
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,746
Number of Sequences: 336
Number of extensions: 3107
Number of successful extensions: 35
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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