Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30c19
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81095-4|CAB03160.1| 262|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z81089-7|CAB03139.1| 262|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z73975-1|CAA98276.1| 282|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 31 0.37
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 31 0.37
U97196-13|AAK68666.1| 430|Caenorhabditis elegans Altered averme... 30 1.1
U41113-1|AAC25482.1| 430|Caenorhabditis elegans inhibitory amin... 30 1.1
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 28 3.4
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 28 3.4
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 28 3.4
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 28 3.4
AF016445-3|AAC69063.2| 372|Caenorhabditis elegans Serpentine re... 28 3.4
Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical p... 28 4.6
Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical pr... 28 4.6
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ... 28 4.6
AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A ... 28 4.6
AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B ... 28 4.6
U13019-2|AAM15600.1| 192|Caenorhabditis elegans Homolog of odr-... 27 6.0
U13019-1|AAM15601.1| 196|Caenorhabditis elegans Homolog of odr-... 27 6.0
Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z81588-2|CAB04712.1| 379|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z66520-8|CAE17837.1| 357|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z81095-4|CAB03160.1| 262|Caenorhabditis elegans Hypothetical
protein F59F4.4 protein.
Length = 262
Score = 66.1 bits (154), Expect = 1e-11
Identities = 36/89 (40%), Positives = 56/89 (62%)
Frame = +3
Query: 237 KILKHVTKIMNLKWELRNGEILAEERGAVVVSNHQYTLDVLGMFNIWDVADRISXIAKKE 416
KI + +T M +++ELRN EIL +++ ++++NHQ LDVLGM W V D + + K
Sbjct: 61 KIFQAMTWPMGVRFELRNSEILHDKKPYIIIANHQSALDVLGMSFAWPV-DCV-VMLKSS 118
Query: 417 LFYVWPFGLSAYLAGVVFIDRYDPKEAYK 503
L Y+ F L AYL V+I+R+ ++A K
Sbjct: 119 LKYLPGFNLCAYLCDSVYINRFSKEKALK 147
>Z81089-7|CAB03139.1| 262|Caenorhabditis elegans Hypothetical
protein F59F4.4 protein.
Length = 262
Score = 66.1 bits (154), Expect = 1e-11
Identities = 36/89 (40%), Positives = 56/89 (62%)
Frame = +3
Query: 237 KILKHVTKIMNLKWELRNGEILAEERGAVVVSNHQYTLDVLGMFNIWDVADRISXIAKKE 416
KI + +T M +++ELRN EIL +++ ++++NHQ LDVLGM W V D + + K
Sbjct: 61 KIFQAMTWPMGVRFELRNSEILHDKKPYIIIANHQSALDVLGMSFAWPV-DCV-VMLKSS 118
Query: 417 LFYVWPFGLSAYLAGVVFIDRYDPKEAYK 503
L Y+ F L AYL V+I+R+ ++A K
Sbjct: 119 LKYLPGFNLCAYLCDSVYINRFSKEKALK 147
>Z73975-1|CAA98276.1| 282|Caenorhabditis elegans Hypothetical
protein T06E8.1 protein.
Length = 282
Score = 50.8 bits (116), Expect = 6e-07
Identities = 27/63 (42%), Positives = 37/63 (58%)
Frame = +3
Query: 309 ERGAVVVSNHQYTLDVLGMFNIWDVADRISXIAKKELFYVWPFGLSAYLAGVVFIDRYDP 488
E AVV+ NHQ +LD+L M +IW + K+ L YV F L AY + +FIDRY+
Sbjct: 89 EGPAVVICNHQSSLDILSMASIW--PKNCVVMMKRILAYVPFFNLGAYFSNTIFIDRYNR 146
Query: 489 KEA 497
+ A
Sbjct: 147 ERA 149
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.37
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 117 KIKYHFYFISFYVSCCMLALVMWPLFLF 200
K ++ FY + Y+ CML +V W F F
Sbjct: 271 KREFSFYLLQLYIPSCMLVIVSWVSFWF 298
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.37
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 117 KIKYHFYFISFYVSCCMLALVMWPLFLF 200
K ++ FY + Y+ CML +V W F F
Sbjct: 271 KREFSFYLLQLYIPSCMLVIVSWVSFWF 298
>U97196-13|AAK68666.1| 430|Caenorhabditis elegans Altered
avermectin sensitivityprotein 14, isoform b protein.
Length = 430
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 123 KYHFYFISFYVSCCMLALVMWPLF 194
+Y +Y I Y+ C ML +V W F
Sbjct: 252 EYSYYLIQLYIPCIMLVVVSWVSF 275
>U41113-1|AAC25482.1| 430|Caenorhabditis elegans inhibitory amino
acid receptorsubunit gbr-2B protein.
Length = 430
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 123 KYHFYFISFYVSCCMLALVMWPLF 194
+Y +Y I Y+ C ML +V W F
Sbjct: 252 EYSYYLIQLYIPCIMLVVVSWVSF 275
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 117 KIKYHFYFISFYVSCCMLALVMWPLFLFSPK 209
K +Y FY I YV + +V W F PK
Sbjct: 236 KRRYGFYIIQAYVPTYLTIIVSWVSFCMEPK 266
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 117 KIKYHFYFISFYVSCCMLALVMWPLFLFSPK 209
K +Y FY I YV + +V W F PK
Sbjct: 236 KRRYGFYIIQAYVPTYLTIIVSWVSFCMEPK 266
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 117 KIKYHFYFISFYVSCCMLALVMWPLFLFSPK 209
K +Y FY I YV + +V W F PK
Sbjct: 236 KRRYGFYIIQAYVPTYLTIIVSWVSFCMEPK 266
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 117 KIKYHFYFISFYVSCCMLALVMWPLFLFSPK 209
K +Y FY I YV + +V W F PK
Sbjct: 236 KRRYGFYIIQAYVPTYLTIIVSWVSFCMEPK 266
>AF016445-3|AAC69063.2| 372|Caenorhabditis elegans Serpentine
receptor, class w protein133 protein.
Length = 372
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = -3
Query: 280 SHFKFIIFVTCFSIFAAHLVFLTFFGLNRKSGHITNANIQQET*NDMK*K*YLILFGSLS 101
S +++I CF I H++ LT RKS ++ N+ YL+ FG+L+
Sbjct: 38 SAYEYIASCVCFLINVVHILVLT-----RKSMRTSSINVIMTAVAIFDICSYLLNFGTLA 92
Query: 100 VIFLNKYANVNN 65
V ++ Y+ N
Sbjct: 93 VRIISSYSKCFN 104
>Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 27.9 bits (59), Expect = 4.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 123 KYHFYFISFYVSCCMLALVMWPLF 194
++ +Y + Y+ CML +V W F
Sbjct: 465 QFSYYLLQLYIPSCMLVIVSWVSF 488
>Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical
protein R11G10.1b protein.
Length = 478
Score = 27.9 bits (59), Expect = 4.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 123 KYHFYFISFYVSCCMLALVMWPLF 194
++ +Y + Y+ CML +V W F
Sbjct: 286 QFSYYLLQLYIPSCMLVIVSWVSF 309
>Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 27.9 bits (59), Expect = 4.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 123 KYHFYFISFYVSCCMLALVMWPLF 194
++ +Y + Y+ CML +V W F
Sbjct: 465 QFSYYLLQLYIPSCMLVIVSWVSF 488
>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
protein C26G2.1 protein.
Length = 1270
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 218 PYIFWAEQEKRPHHQCQHTTRDIK*YEIKMIFNFI 114
P +FW + KR H+T D + EIK I++FI
Sbjct: 265 PDVFWYHENKRLQ---SHSTLDTRSKEIKNIYSFI 296
>AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A
protein protein.
Length = 657
Score = 27.9 bits (59), Expect = 4.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 123 KYHFYFISFYVSCCMLALVMWPLF 194
++ +Y + Y+ CML +V W F
Sbjct: 465 QFSYYLLQLYIPSCMLVIVSWVSF 488
>AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B
protein protein.
Length = 478
Score = 27.9 bits (59), Expect = 4.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 123 KYHFYFISFYVSCCMLALVMWPLF 194
++ +Y + Y+ CML +V W F
Sbjct: 286 QFSYYLLQLYIPSCMLVIVSWVSF 309
>U13019-2|AAM15600.1| 192|Caenorhabditis elegans Homolog of
odr-2(two) protein 4,isoform a protein.
Length = 192
Score = 27.5 bits (58), Expect = 6.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 406 PKKNCFTFGHLVFLPIWPE 462
PK +CF+ V+LP+W +
Sbjct: 36 PKSHCFSCASFVYLPLWSQ 54
>U13019-1|AAM15601.1| 196|Caenorhabditis elegans Homolog of
odr-2(two) protein 4,isoform b protein.
Length = 196
Score = 27.5 bits (58), Expect = 6.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 406 PKKNCFTFGHLVFLPIWPE 462
PK +CF+ V+LP+W +
Sbjct: 36 PKSHCFSCASFVYLPLWSQ 54
>Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical
protein K05D4.3 protein.
Length = 321
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 277 HFKF-IIFVTCFSIFAAHLVFLTFFGLNRKSGHITNAN 167
HF F +I + CF++ ++ L L F L + H+T +N
Sbjct: 79 HFGFYVIVIICFALNSSTLFILVFLFLILWAAHLTMSN 116
>Z81588-2|CAB04712.1| 379|Caenorhabditis elegans Hypothetical
protein T07D10.2 protein.
Length = 379
Score = 27.1 bits (57), Expect = 8.0
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Frame = +3
Query: 57 SSILFTFA--YLFKK----ITDREPNKIKYHFYFISFYVSCCML--ALVMWPLFLFSPKN 212
++ILF+ YLF+K ++ ++Y Y F +L A+ W L+L K
Sbjct: 177 AAILFSTPQLYLFEKRNGDCSENYTTALQYQLYVCLFNSVVWLLPSAIAGW-LYLCVCKA 235
Query: 213 V-RNTKWAAKILKHVTKIMNLKWELRNGEILAEERGAVV 326
V ++T +++ + ++ K+ ++K +NG + A +GA +
Sbjct: 236 VWKSTSFSSSLRNNMKKMEHMKLTEKNGGMQAHHKGATM 274
>Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical
protein ZK897.1 protein.
Length = 1396
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 298 ISPFRSSHFKFIIFVTCFSIFAAHLVFLTFF 206
+S F S + F + F F HL+F+ FF
Sbjct: 4 LSSFFMSSYSFFLSAVLFCCFLKHLLFMFFF 34
>Z66520-8|CAE17837.1| 357|Caenorhabditis elegans Hypothetical
protein F49E12.12 protein.
Length = 357
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +3
Query: 72 TFAYLFKKITDREPNKIKYHFYFISFYVSCCMLALVMWPLFLFSPKNVRNTKWAAKILKH 251
T+ YL +R+ +++ + I+ + C + + FL++ + +T+W A I ++
Sbjct: 224 TYTYLESYDVNRKNSRVLERVFCIALFAFCLPVVCKDYISFLYTYPCLYHTEWPAAICEY 283
Query: 252 V 254
+
Sbjct: 284 I 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,765,350
Number of Sequences: 27780
Number of extensions: 275620
Number of successful extensions: 829
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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