Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30c18
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 31 0.70
AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical... 29 2.1
AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical... 29 2.1
AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81586-10|CAD56598.1| 349|Caenorhabditis elegans Hypothetical p... 29 3.7
Z81072-6|CAB03017.2| 196|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 29 3.7
AF016655-9|AAK31440.1| 348|Caenorhabditis elegans Hypothetical ... 29 3.7
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF067613-7|AAY86236.1| 123|Caenorhabditis elegans Hypothetical ... 28 4.9
Z49127-11|CAA88952.2| 452|Caenorhabditis elegans Hypothetical p... 28 6.5
AL033535-4|CAA22134.2| 452|Caenorhabditis elegans Hypothetical ... 28 6.5
AF022980-3|AAG24187.2| 396|Caenorhabditis elegans Serpentine re... 28 6.5
U23449-5|AAC24296.2| 365|Caenorhabditis elegans Hypothetical pr... 27 8.6
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 31.1 bits (67), Expect = 0.70
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +2
Query: 248 IRSVTRKNNDLRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEH---YSVSCQNGS 418
I+ +K ++L++ + + +E +LER+ DK D ++ KD H Q
Sbjct: 1072 IQKQAKKIDELKEECRKRKNEA-SRLERKLEDKEAMMADCVKELKDSHKERLKEMEQKVE 1130
Query: 419 VLKSKFAKILKSHDYTDKKSIETYEK 496
+K K +K L++ + T K IET+++
Sbjct: 1131 DVKRKNSK-LENENSTQKSQIETFQR 1155
>AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical
protein B0511.14b protein.
Length = 470
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 239 SGPIRSVTRKNNDLRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKD 385
+GP S R+++D R K K DEQ D Y +KI + NIQ ++
Sbjct: 310 TGPSTSSERRSSDPTIRKKGKTDEQLD----HYHEKIREKYRNIQKIQE 354
>AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical
protein B0511.14a protein.
Length = 551
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 239 SGPIRSVTRKNNDLRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKD 385
+GP S R+++D R K K DEQ D Y +KI + NIQ ++
Sbjct: 310 TGPSTSSERRSSDPTIRKKGKTDEQLD----HYHEKIREKYRNIQKIQE 354
>AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical
protein F19B10.4 protein.
Length = 464
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 269 NNDLRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEHYSV 400
N DL ++ ++ + FD+L + D +D ++I++ K YS+
Sbjct: 420 NEDLDEQSLEEIQKAFDELFEKVRDDLDDLENDIEWAKAISYSM 463
>Z81586-10|CAD56598.1| 349|Caenorhabditis elegans Hypothetical
protein T05F1.13 protein.
Length = 349
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 314 FDQLEREYSDKIDGFHDNIQYFKDEHYSVSCQNGSVLK 427
FD +E E DK + Q+++DE + C NG +K
Sbjct: 291 FDGIEYELFDK--NLNSGTQFYEDEEKKIDCLNGRNIK 326
>Z81072-6|CAB03017.2| 196|Caenorhabditis elegans Hypothetical
protein F30A10.9 protein.
Length = 196
Score = 28.7 bits (61), Expect = 3.7
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 4/149 (2%)
Frame = +2
Query: 116 IDVSQTVIRDCHVDEQTRELVYINKIMNTQLTKPVLMMFNIS-GPIRSVTRKNNDLRDRI 292
I Q VIR VDEQ +LV KI + + M +N GP V N + +
Sbjct: 25 IKEEQRVIRTPKVDEQELKLVRAPKI-----SSAMFMKYNTQLGPPFHVIVDTNFVNFAV 79
Query: 293 KSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEHYSVSCQNGSVLKSKFA-KILKSHDYTD 469
K+++D + + + D + F I Y D V + V + K A K+LK
Sbjct: 80 KNRID-----MFQGFMDCL--FAKTIVYATD---CVLAELEKVRRFKIALKVLKDPRVQR 129
Query: 470 KKSIE--TYEKYCLPQLVDKHNDCYVAVC 550
K TY CL Q V +H VA C
Sbjct: 130 LKCEHKGTYADDCLVQRVTQHKCYIVATC 158
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 219 TGFVNCVFIILLMYTNSLVCSST*QSRITVWDTSISTGK 103
TG N V+ +L S+VCS + + I VWD + G+
Sbjct: 413 TGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQ 451
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 219 TGFVNCVFIILLMYTNSLVCSST*QSRITVWDTSISTGK 103
TG N V+ +L S+VCS + + I VWD + G+
Sbjct: 415 TGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQ 453
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 219 TGFVNCVFIILLMYTNSLVCSST*QSRITVWDTSISTGK 103
TG N V+ +L S+VCS + + I VWD + G+
Sbjct: 415 TGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQ 453
>AF016655-9|AAK31440.1| 348|Caenorhabditis elegans Hypothetical
protein C17F4.5 protein.
Length = 348
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +2
Query: 281 RDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEHYSVSCQNGSVLKSKFAKILKSHD 460
R ++S D D R DG +NI+ + HY + N ++K FA D
Sbjct: 205 RIHLESADDYTVDDFMRLIEKWADGTTENIKTAGNFHYKFTLSNPELVKQVFALSEVLGD 264
Query: 461 YTDKKSIETYEKYC 502
K I+ + K C
Sbjct: 265 AGKKDPIKFFGKVC 278
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical protein
F44E2.4 protein.
Length = 1283
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 395 SVSCQNGSVLKSKFAKILKSHDYTDKKSIETYEKYCLPQLVDKHNDCYVAVCVLKP 562
++SC G + KFA+ ++S T K+ + + LP+ +D D VA C P
Sbjct: 910 NLSCLFGQAQEPKFAQCIRSTISTLKQFNLSTLRAVLPKFIDCTRDIVVAKCGESP 965
>AF067613-7|AAY86236.1| 123|Caenorhabditis elegans Hypothetical
protein F56D6.12 protein.
Length = 123
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 272 NDLRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEHYSVSCQN 412
+D D+ SK+ FD + +D I F+D K EH ++ +N
Sbjct: 20 DDTHDKTVSKLKNDFD---KNTADSIKNFNDEAAKNKKEHEKIAAEN 63
>Z49127-11|CAA88952.2| 452|Caenorhabditis elegans Hypothetical
protein F13D12.9 protein.
Length = 452
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 278 LRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEH-YSVSCQNGS 418
L D +K D F +LE+ KID D ++ D+H + C G+
Sbjct: 202 LFDEVKPVTDVDFVELEKAQYKKIDRLIDQLELKADDHVLEIGCGWGA 249
>AL033535-4|CAA22134.2| 452|Caenorhabditis elegans Hypothetical
protein F13D12.9 protein.
Length = 452
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 278 LRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEH-YSVSCQNGS 418
L D +K D F +LE+ KID D ++ D+H + C G+
Sbjct: 202 LFDEVKPVTDVDFVELEKAQYKKIDRLIDQLELKADDHVLEIGCGWGA 249
>AF022980-3|AAG24187.2| 396|Caenorhabditis elegans Serpentine
receptor, class w protein2 protein.
Length = 396
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = -2
Query: 544 RHVAVVVFVDQLGQTVFFVSFNRLFIGIIMTF*NFSKLAFQHAAILATYRIVFIFKILDV 365
++V + + D++ +V F + + + S L + ++ YRI+ + ILD+
Sbjct: 25 KYVEIPSWFDEVFLKFNYVIAILQFFAVAINLIHLSVLTRKELRAISIYRIMIVICILDI 84
Query: 364 IVKSINFIA 338
I + ++FI+
Sbjct: 85 ISEILSFIS 93
>U23449-5|AAC24296.2| 365|Caenorhabditis elegans Hypothetical
protein K06A1.1 protein.
Length = 365
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 296 SKVDEQFDQLEREYSDKIDGFHDNIQYFKDEHYSVSC 406
S+ DE+ ++ ++ S + F++N++ F H +SC
Sbjct: 18 SQCDEEDEEEQQRQSSQRPPFYENMRTFAPSHMHISC 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,455,176
Number of Sequences: 27780
Number of extensions: 310975
Number of successful extensions: 912
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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