Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30c10
(595 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003501-1|AAH03501.1| 416|Homo sapiens chromosome 20 open read... 31 3.1
AY359076-1|AAQ89435.1| 372|Homo sapiens C20orf3 protein. 31 3.1
AL035661-4|CAB75499.1| 416|Homo sapiens chromosome 20 open read... 31 3.1
AK026866-1|BAB15578.1| 220|Homo sapiens protein ( Homo sapiens ... 31 3.1
AK025834-1|BAB15253.1| 220|Homo sapiens protein ( Homo sapiens ... 31 3.1
AB033767-1|BAB11885.1| 429|Homo sapiens BSCv protein. 31 3.1
BC122862-1|AAI22863.1| 299|Homo sapiens ubiquinol-cytochrome c ... 31 4.1
BC119013-1|AAI19014.1| 299|Homo sapiens ubiquinol-cytochrome c ... 31 4.1
BC105791-1|AAI05792.1| 299|Homo sapiens ubiquinol-cytochrome c ... 31 4.1
AY050659-1|AAL13118.1| 299|Homo sapiens CBP3 protein. 31 4.1
AL389874-8|CAI15741.1| 219|Homo sapiens chromosome 20 open read... 31 4.1
AL389874-5|CAI15740.2| 272|Homo sapiens chromosome 20 open read... 31 4.1
AL389874-4|CAI15738.1| 299|Homo sapiens chromosome 20 open read... 31 4.1
AL389874-3|CAI15743.1| 273|Homo sapiens chromosome 20 open read... 31 4.1
AL389874-1|CAM22187.1| 221|Homo sapiens chromosome 20 open read... 31 4.1
AL121752-8|CAI21451.1| 219|Homo sapiens chromosome 20 open read... 31 4.1
AL121752-5|CAI21453.2| 272|Homo sapiens chromosome 20 open read... 31 4.1
AL121752-4|CAI21449.1| 299|Homo sapiens chromosome 20 open read... 31 4.1
AL121752-3|CAI21452.1| 273|Homo sapiens chromosome 20 open read... 31 4.1
AL121752-1|CAM28249.1| 221|Homo sapiens chromosome 20 open read... 31 4.1
AK022650-1|BAB14156.1| 213|Homo sapiens protein ( Homo sapiens ... 31 4.1
AK001712-1|BAA91854.1| 299|Homo sapiens protein ( Homo sapiens ... 31 4.1
>BC003501-1|AAH03501.1| 416|Homo sapiens chromosome 20 open reading
frame 3 protein.
Length = 416
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 564 LVVKINSNQTSLENFPNRSEVSELSSQGTSRRTLNVPQG 448
++ K+ S +T ++ P S V ELS G RR+L+ P G
Sbjct: 344 MIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDG 382
>AY359076-1|AAQ89435.1| 372|Homo sapiens C20orf3 protein.
Length = 372
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 564 LVVKINSNQTSLENFPNRSEVSELSSQGTSRRTLNVPQG 448
++ K+ S +T ++ P S V ELS G RR+L+ P G
Sbjct: 300 MIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDG 338
>AL035661-4|CAB75499.1| 416|Homo sapiens chromosome 20 open reading
frame 3 protein.
Length = 416
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 564 LVVKINSNQTSLENFPNRSEVSELSSQGTSRRTLNVPQG 448
++ K+ S +T ++ P S V ELS G RR+L+ P G
Sbjct: 344 MIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDG 382
>AK026866-1|BAB15578.1| 220|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23213 fis, clone ADSU01581. ).
Length = 220
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 564 LVVKINSNQTSLENFPNRSEVSELSSQGTSRRTLNVPQG 448
++ K+ S +T ++ P S V ELS G RR+L+ P G
Sbjct: 148 MIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDG 186
>AK025834-1|BAB15253.1| 220|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22181 fis, clone HRC00945. ).
Length = 220
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 564 LVVKINSNQTSLENFPNRSEVSELSSQGTSRRTLNVPQG 448
++ K+ S +T ++ P S V ELS G RR+L+ P G
Sbjct: 148 MIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDG 186
>AB033767-1|BAB11885.1| 429|Homo sapiens BSCv protein.
Length = 429
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 564 LVVKINSNQTSLENFPNRSEVSELSSQGTSRRTLNVPQG 448
++ K+ S +T ++ P S V ELS G RR+L+ P G
Sbjct: 357 MIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDG 395
>BC122862-1|AAI22863.1| 299|Homo sapiens ubiquinol-cytochrome c
reductase complex chaperone, CBP3 homolog (yeast)
protein.
Length = 299
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSQACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>BC119013-1|AAI19014.1| 299|Homo sapiens ubiquinol-cytochrome c
reductase complex chaperone, CBP3 homolog (yeast)
protein.
Length = 299
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSQACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>BC105791-1|AAI05792.1| 299|Homo sapiens ubiquinol-cytochrome c
reductase complex chaperone, CBP3 homolog (yeast)
protein.
Length = 299
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSRACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AY050659-1|AAL13118.1| 299|Homo sapiens CBP3 protein.
Length = 299
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSQACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AL389874-8|CAI15741.1| 219|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 219
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSRACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AL389874-5|CAI15740.2| 272|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 272
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSRACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AL389874-4|CAI15738.1| 299|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 299
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSRACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AL389874-3|CAI15743.1| 273|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 273
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSRACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AL389874-1|CAM22187.1| 221|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 221
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSRACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AL121752-8|CAI21451.1| 219|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 219
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSRACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AL121752-5|CAI21453.2| 272|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 272
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSRACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AL121752-4|CAI21449.1| 299|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 299
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSRACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AL121752-3|CAI21452.1| 273|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 273
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSRACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AL121752-1|CAM28249.1| 221|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 221
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSRACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AK022650-1|BAB14156.1| 213|Homo sapiens protein ( Homo sapiens
cDNA FLJ12588 fis, clone NT2RM4001256, weakly similar to
Xenopus laevis putative Zic3 binding protein mRNA. ).
Length = 213
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSQACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
>AK001712-1|BAA91854.1| 299|Homo sapiens protein ( Homo sapiens
cDNA FLJ10850 fis, clone NT2RP4001474, weakly similar to
Xenopus laevis putative Zic3 binding protein mRNA. ).
Length = 299
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 570 VCLVVKINSNQTSLENF-PNRSEVSELS-SQGTSRRTLNVPQGWFSINVQIVCGPQMEIY 397
+ L+V++ NQTS+ + P S + +S +QG R L+ W ++ CG +I
Sbjct: 1 MALLVRVLRNQTSISQWVPVCSRLIPVSPTQGQGDRALSRTSQWPQMSQSQACGGSEQIP 60
Query: 396 DIVVQCPGSVHDSR 355
I +Q H +R
Sbjct: 61 GIDIQLNRKYHTTR 74
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,056,159
Number of Sequences: 237096
Number of extensions: 1325984
Number of successful extensions: 1806
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1806
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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