Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30c10
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   3.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   3.9  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   6.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   9.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   9.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.1  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 435 NVQIVCGPQMEIYDI 391
           NV+ VC PQ+ ++D+
Sbjct: 143 NVRSVCPPQLLVFDL 157


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -2

Query: 555 KINSNQTSLENFPNRSEVSELSSQGTSRRTLNVPQGWFSI 436
           +IN   T   NF    ++++ + +  + +TL +  G F I
Sbjct: 307 RINKQHTRGNNFSLSRKLAKFAKEKKAAKTLGIVMGVFII 346


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -2

Query: 435 NVQIVCGPQMEIYDI 391
           N+Q++C P++  +D+
Sbjct: 149 NIQLMCSPKLLAFDL 163


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 231 DYKFYLYNNKLVVVEKHFNNTMQSKSHKS 145
           +Y  ++  ++ VV  K  +NT++  SH+S
Sbjct: 534 NYMNFMQMDEFVVNLKSGSNTIERNSHES 562


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 398 MILLCNVLDLCMI 360
           +ILL N++D+C I
Sbjct: 82  LILLQNIIDICWI 94


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 231 DYKFYLYNNKLVVVEKHFNNTMQSKSHKS 145
           +Y  ++  ++ VV  K  +NT++  SH+S
Sbjct: 534 NYMNFMQMDEFVVNLKSGSNTIERNSHES 562


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 231 DYKFYLYNNKLVVVEKHFNNTMQSKSHKS 145
           +Y  ++  ++ VV  K  +NT++  SH+S
Sbjct: 160 NYMNFMQMDEFVVNLKSGSNTIERNSHES 188


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -2

Query: 435 NVQIVCGPQMEIYDI 391
           N Q +C P++ ++D+
Sbjct: 149 NTQPMCSPKLHVFDL 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,433
Number of Sequences: 438
Number of extensions: 3212
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)