Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30c04
         (465 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.80 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   4.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.4  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   7.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.80
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 284 CCVSSRPNLFLIIILCLEYLS 222
           CC     N+ L+ +LCL+Y +
Sbjct: 183 CCAFIFFNMHLLFLLCLDYFT 203



 Score = 21.8 bits (44), Expect = 3.2
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = -3

Query: 448 KVIYFFCKSFCVLLYVI*ILCA 383
           ++ YF+C S    ++++ +LC+
Sbjct: 55  RIYYFYCVSITFNVHLLFLLCS 76



 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 281 CVSSRPNLFLIIILCLEYLS 222
           CVS   N+ L+ +LC  Y +
Sbjct: 61  CVSITFNVHLLFLLCSGYFT 80



 Score = 20.6 bits (41), Expect = 7.4
 Identities = 6/24 (25%), Positives = 13/24 (54%)
 Frame = -3

Query: 445 VIYFFCKSFCVLLYVI*ILCALDF 374
           + YF+C      ++++ +LC   F
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYHF 169



 Score = 20.2 bits (40), Expect = 9.8
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -3

Query: 442 IYFFCKSFCV 413
           IY+FC++F +
Sbjct: 298 IYYFCRAFII 307


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 109 MYLRYYLNDKGDREYTLATIDPFG 180
           +Y  +Y++DK  R  +L  +D  G
Sbjct: 179 LYYSFYISDKAARPRSLQFVDSEG 202


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -2

Query: 263 NLFLIIILCLEYLSSGE--KRAGCADNVGFPNG 171
           NL ++   C  Y   G   K  GC+DN GF  G
Sbjct: 6   NLGIMHRHCFGYPFQGTTYKYTGCSDNDGFLPG 38


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 351 DTF*QLFSKSKAHRIYITYNRTQKLLQKK 437
           D F  L S + A+R     +RTQ + + K
Sbjct: 231 DVFVMLLSTALAYRFTQVTDRTQSMSESK 259


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 351 DTF*QLFSKSKAHRIYITYNRTQKLLQKK 437
           D F  L S + A+R     +RTQ + + K
Sbjct: 231 DVFVMLLSTALAYRFTQVTDRTQSMSESK 259


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 351 DTF*QLFSKSKAHRIYITYNRTQKLLQKK 437
           D F  L S + A+R     +RTQ + + K
Sbjct: 231 DVFVMLLSTALAYRFTQVTDRTQSMSESK 259


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 202 PARFSPEDKYSRH 240
           P RF PE+   RH
Sbjct: 126 PERFRPENSQKRH 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,533
Number of Sequences: 336
Number of extensions: 2401
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)