Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30c04
         (465 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    28   0.18 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    28   0.18 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   5.3  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   5.3  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    22   9.2  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.18
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +1

Query: 172 PFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQPEP 294
           P  KPT  A P RF P         ++++ F L   Q P+P
Sbjct: 124 PIPKPTPEAEPVRFDPS--------VLRRNFALKTAQTPDP 156


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 0.18
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +1

Query: 172 PFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQPEP 294
           P  KPT  A P RF P         ++++ F L   Q P+P
Sbjct: 129 PIPKPTPEAEPVRFDPS--------VLRRNFALKTAQTPDP 161


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 57  ILFVCGNPVIPRVYCSV 7
           ILF+CGN ++  V+ ++
Sbjct: 697 ILFICGNYILLNVFLAI 713


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 199 VLTMLVFQMGRWSLMCTLYRLYRLSNT 119
           + TM++  +  W+ +C L   YR ++T
Sbjct: 313 LFTMILVSLSVWTTVCVLNVWYRSTST 339


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 202 PARFSPEDKYSRH 240
           P RFSPE +  RH
Sbjct: 418 PERFSPEQEAKRH 430


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,058
Number of Sequences: 2352
Number of extensions: 9108
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)