Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30b24
(614 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 30 0.23
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.40
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 1.6
SPAC13G7.12c |||choline kinase |Schizosaccharomyces pombe|chr 1|... 27 2.8
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 2.8
SPAC22E12.16c |pik1||phosphatidylinositol kinase Pik1|Schizosacc... 27 2.8
SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosa... 26 3.8
SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces pom... 26 3.8
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 26 3.8
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 5.0
SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.0
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 26 5.0
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.0
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 26 5.0
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 26 5.0
SPBC31F10.05 |mug37||sequence orphan|Schizosaccharomyces pombe|c... 26 5.0
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch... 25 8.7
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 25 8.7
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 8.7
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 25 8.7
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 30.3 bits (65), Expect = 0.23
Identities = 26/102 (25%), Positives = 49/102 (48%)
Frame = +3
Query: 276 NVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDH 455
+++ +K N + SKK +DL+ E ++ E L+ ++ N +L+N S
Sbjct: 1180 DLEGLKDVDTNFQELSKKHRDLTFNHESLLRQSASYKEKLSLA---SSENKDLSNKVSSL 1236
Query: 456 SNGSSEVLSEKADGQGETVNKVTNDVNSVQHNDTSNNFEGKK 581
+ +E LS KA E K+TN ++ +++ FE +K
Sbjct: 1237 TKQVNE-LSPKASKVPELERKITNLMH--EYSQLGKTFEDEK 1275
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 29.5 bits (63), Expect = 0.40
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 267 ADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHI-NNINSNLTNG 443
++NN++ + + + K +AD L IKS ++++ +N L++ NN+ S+
Sbjct: 316 SNNNLKLNEAEENQNLLNLRSPKSSGKADNLTIKSSSNIDKVTSNDLYLDNNLQSHFKVT 375
Query: 444 TSDHSN 461
S +N
Sbjct: 376 ESQPTN 381
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/69 (23%), Positives = 37/69 (53%)
Frame = +3
Query: 279 VQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHS 458
++ +K S+++ + + ++D + DE S + NE +++ + N T+G+ DH+
Sbjct: 93 IRKVKSSKLSPISNMEDSEDKKEEDE----SSSYKNEFKSSSSASVSSNFEKTSGSDDHN 148
Query: 459 NGSSEVLSE 485
+ S L+E
Sbjct: 149 SQSPVPLNE 157
>SPAC13G7.12c |||choline kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 354 ELCIKSQEHLNETLANTLHINNINSNLTN 440
+L I S + TL N LHI I+ LTN
Sbjct: 46 KLAISSWNRIPLTLCNKLHIKRISGALTN 74
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.6 bits (56), Expect = 2.8
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Frame = +3
Query: 297 SQMNTKNKSKKTKDLSQADELCIKSQEHLNETL---ANTLH--INNINSNLTNGTSDHSN 461
S +K +SK+ ++ ++ + NE+L A+ LH +N+ NSN+ +N
Sbjct: 785 SDQKSKFESKQQDLIANIGKIVSNFLQEQNESLYTKADILHSHLNDTNSNIRKANEIMNN 844
Query: 462 GSSEVLSEKADGQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPSINRCL 611
S E L A Q E V + N S + K + S +R +
Sbjct: 845 RSEEFL-RNAASQAEIVGANKERIQKTVENG-SQLLDSKSKAIHSNSRSM 892
>SPAC22E12.16c |pik1||phosphatidylinositol kinase
Pik1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/63 (22%), Positives = 26/63 (41%)
Frame = +3
Query: 381 LNETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKADGQGETVNKVTNDVNSVQHNDTS 560
L ET+ N + +++I NLT + ++ + + K D NS ++
Sbjct: 629 LIETITNAISVHSIKKNLTKQLREAELAQGKIAGKNVVTLKDYFIKQFGDPNSSRYRQAQ 688
Query: 561 NNF 569
NF
Sbjct: 689 TNF 691
>SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 26.2 bits (55), Expect = 3.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 399 NTLHINNINSNLTNGTSDHSNGSSEVLSEKADGQGETVNKVTNDVNSVQ 545
N LHINN + N N LS + + +NK+ +N +Q
Sbjct: 23 NELHINNSGMSELNKKLQLPNVELSTLSHTQEQEFNELNKLIRKINELQ 71
>SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 431
Score = 26.2 bits (55), Expect = 3.8
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -1
Query: 380 MFLTLYT-KFISLRKIFGLFTFIFRVHLTTLYILNVVIRYFIHDVDLPRLFTHSKDF*AR 204
M +LY +F L + G FIF++ + TLYI + R+ + L + + + +
Sbjct: 46 MVTSLYHFRFYGLNTL-GKIIFIFQLSILTLYICCITFRFIRYPGTLSKTWKNPSEVLFM 104
Query: 203 PISVL 189
P ++L
Sbjct: 105 PTALL 109
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 411 CVEY*LKSHSNVLDSLYKVHQLEKDL 334
C E+ SH +V D LY L KDL
Sbjct: 34 CKEWLKSSHPDVYDKLYGEQDLSKDL 59
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 423 NSNLTNGTSDHSNGSSEVLSEKADGQGETV 512
N N+ T DH N +S V+ E+ + Q + V
Sbjct: 793 NENMGETTVDHENINSNVMDEQGEKQKDDV 822
>SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 5.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 384 NETLANTLH-INNINSNLTNGTSDHSNGSSEVLSEKAD 494
N ++ N + +N+ NSN+ NG+S + N SS L KA+
Sbjct: 179 NSSINNMVSTVNSENSNVNNGSSLNGNTSSN-LKRKAN 215
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 264 VADNNVQNIKCSQMNTKNKSKKTKDLSQADELC 362
+ N V+N+KCS T + SK ++ LS ELC
Sbjct: 373 ICSNAVKNLKCSANGTPSGSKISQVLS---ELC 402
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 25.8 bits (54), Expect = 5.0
Identities = 19/94 (20%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +3
Query: 327 KTKDLSQADELCIKSQEHLNETLANTLHINNIN-SNLTNGTSDHSNGSSEVLSEKADGQG 503
K + ++ D + I S +++ + L+ + + + L+ G+ ++ + + + Q
Sbjct: 765 KVEVVAAHDAVSISSNSSTHKSHSEPLNRDELEVAALSRGSLPEPPKPNKQIVVQEEDQR 824
Query: 504 ETVNKVTNDVNSVQHNDTS-NNFEGKKTTMPSIN 602
+T++ T+ H+ ++ NN + TT PSIN
Sbjct: 825 DTLSLKTSTTGLSSHSKSAENNSTQQSTTSPSIN 858
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -3
Query: 225 FKGFLSSSNFCFIPTYTSSPCQIHRGVSPTSWQVDLSFKTPFQL 94
F F + C+I + P QIH +P +D +T FQL
Sbjct: 256 FSEFFDGAEICYI-SGRQYPVQIHYTYTPEPDYLDACLRTIFQL 298
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.8 bits (54), Expect = 5.0
Identities = 12/56 (21%), Positives = 23/56 (41%)
Frame = +3
Query: 396 ANTLHINNINSNLTNGTSDHSNGSSEVLSEKADGQGETVNKVTNDVNSVQHNDTSN 563
A + + + +N + DH +++ ++E V V VQH D S+
Sbjct: 993 AQLVAASRVKANFASKVQDHLEDAAKAVTEACKALVRQVESVALKAKEVQHEDFSS 1048
>SPBC31F10.05 |mug37||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 217
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 276 NVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNE 389
+VQN+ NTKN K+ + D+L + S E+ E
Sbjct: 33 DVQNVYGLDRNTKNLEKRDIQFLENDKLDLNSHENEGE 70
>SPAP8A3.14c |||mitochondrial inner membrane protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 677
Score = 25.0 bits (52), Expect = 8.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 222 KGFLSSSNFCFIPTYTSSPCQIHRGVSPTSWQVD-LSFK 109
+G ++SSN IP Y + R TS VD L+FK
Sbjct: 40 RGVVNSSNLIIIPPYKPKSKSVLRSPYLTSHYVDALAFK 78
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 300 QMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTL-HINNINSNL 434
Q ++K+ KD+ C+K ++ L +TL ++L I N +L
Sbjct: 322 QFFISQRTKRQKDIIDLKLACVKEKQQLIKTLESSLTQIRNERDSL 367
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.0 bits (52), Expect = 8.7
Identities = 17/97 (17%), Positives = 40/97 (41%)
Frame = +3
Query: 276 NVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDH 455
+ N S N +K + D++ D +Q + + A + N++ + +H
Sbjct: 236 SASNTNTSPANGAPTNKPSTDINTTDPATQTTQVSASNSPALSGSSTPSNTSSRSNRQNH 295
Query: 456 SNGSSEVLSEKADGQGETVNKVTNDVNSVQHNDTSNN 566
N S + ++ + NK ++ + +N++ NN
Sbjct: 296 GNFSEKRHYDRYGNSHPSYNKYSHYQHGFNYNNSGNN 332
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 25.0 bits (52), Expect = 8.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 134 LGKLICHLKLHSSWCL 87
+G +CHL LH ++C+
Sbjct: 758 IGADVCHLNLHKTFCI 773
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,200,628
Number of Sequences: 5004
Number of extensions: 40558
Number of successful extensions: 145
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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