Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30b24
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.6  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.4  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   5.9  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   7.8  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   7.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +3

Query: 387  ETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKADGQGET 509
            E   N+ ++ +INS+ ++ T+D +  +       ADG   T
Sbjct: 958  EHSVNSTNVTSINSSSSSSTADRNGDTKSRSPVVADGHNST 998


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 324  KKTKDLSQADELCIKSQEHLNETLANTLHINNINSN 431
            K T++ + A+ L + +  H    L  T++IN+IN N
Sbjct: 1471 KATEECTNAN-LSLDTTSHSGNLLKATVYINDINDN 1505


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 480  SEKADGQGETVNKVTNDVNSVQHNDTSN 563
            S  ADG  ET+N  T+  ++ Q N T N
Sbjct: 2120 SYNADGMVETMNVRTDPTHTFQRNFTYN 2147


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 6/25 (24%), Positives = 18/25 (72%)
 Frame = +3

Query: 288  IKCSQMNTKNKSKKTKDLSQADELC 362
            ++C++ + +N +++T+ + Q +E C
Sbjct: 1046 VRCTRNDLRNVARRTQTVRQREEQC 1070


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/41 (21%), Positives = 17/41 (41%)
 Frame = -3

Query: 213 LSSSNFCFIPTYTSSPCQIHRGVSPTSWQVDLSFKTPFQLV 91
           +SS+   F+         IH G+    W++ L    P+  +
Sbjct: 221 VSSAELYFVKDVLKEASTIHDGIGTPDWRLVLCLLVPWTCI 261


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/41 (21%), Positives = 17/41 (41%)
 Frame = -3

Query: 213 LSSSNFCFIPTYTSSPCQIHRGVSPTSWQVDLSFKTPFQLV 91
           +SS+   F+         IH G+    W++ L    P+  +
Sbjct: 221 VSSAELYFVKDVLKEASTIHDGIGTPDWRLVLCLLVPWTCI 261


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,439
Number of Sequences: 2352
Number of extensions: 8705
Number of successful extensions: 60
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)