Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30b18
(257 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 0.60
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 0.60
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 0.60
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 0.60
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 0.60
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 0.60
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 0.60
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 0.60
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 23 0.80
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 0.80
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 0.80
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 1.1
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 1.8
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 20 4.3
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 20 4.3
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 20 4.3
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 20 4.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 20 5.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 20 5.6
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 19 7.4
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 19 7.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 19 7.4
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 0.60
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = -2
Query: 241 IGFRNRVSPISFE--PKPF-NIDFALSNARR*QRT--GIVLPCVTIAATIITMWRFPP 83
IG + + I+++ P+P+ ++ F + RR +++PCV I++ + + PP
Sbjct: 163 IGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPP 220
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 0.60
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = -2
Query: 241 IGFRNRVSPISFE--PKPF-NIDFALSNARR*QRT--GIVLPCVTIAATIITMWRFPP 83
IG + + I+++ P+P+ ++ F + RR +++PCV I++ + + PP
Sbjct: 163 IGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPP 220
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 0.60
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = -2
Query: 241 IGFRNRVSPISFE--PKPF-NIDFALSNARR*QRT--GIVLPCVTIAATIITMWRFPP 83
IG + + I+++ P+P+ ++ F + RR +++PCV I++ + + PP
Sbjct: 163 IGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPP 220
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 0.60
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = -2
Query: 241 IGFRNRVSPISFE--PKPF-NIDFALSNARR*QRT--GIVLPCVTIAATIITMWRFPP 83
IG + + I+++ P+P+ ++ F + RR +++PCV I++ + + PP
Sbjct: 163 IGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPP 220
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 0.60
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = -2
Query: 241 IGFRNRVSPISFE--PKPF-NIDFALSNARR*QRT--GIVLPCVTIAATIITMWRFPP 83
IG + + I+++ P+P+ ++ F + RR +++PCV I++ + + PP
Sbjct: 163 IGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPP 220
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 0.60
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = -2
Query: 241 IGFRNRVSPISFE--PKPF-NIDFALSNARR*QRT--GIVLPCVTIAATIITMWRFPP 83
IG + + I+++ P+P+ ++ F + RR +++PCV I++ + + PP
Sbjct: 163 IGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPP 220
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 0.60
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = -2
Query: 241 IGFRNRVSPISFE--PKPF-NIDFALSNARR*QRT--GIVLPCVTIAATIITMWRFPP 83
IG + + I+++ P+P+ ++ F + RR +++PCV I++ + + PP
Sbjct: 231 IGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPP 288
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 0.60
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = -2
Query: 241 IGFRNRVSPISFE--PKPF-NIDFALSNARR*QRT--GIVLPCVTIAATIITMWRFPP 83
IG + + I+++ P+P+ ++ F + RR +++PCV I++ + + PP
Sbjct: 231 IGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPP 288
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.6 bits (46), Expect = 0.80
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 14 VQLSGSHASSCNSYSPCGKSPETRRKAPHRYDGSSDG 124
V +SG H N P K+P + R DG++DG
Sbjct: 191 VPISGWHGD--NMLEPSPKTPWYKGWKVERKDGNADG 225
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.6 bits (46), Expect = 0.80
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 56 SMSYKNSHVTPKVE 15
SM KN+HV+ KVE
Sbjct: 212 SMGVKNNHVSSKVE 225
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 0.80
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 95 ALSASSPGTFHRVSMSYKNSHVTPKVELVG 6
A +ASSPG R S ++ + +P LVG
Sbjct: 912 ATAASSPGLLERASPAFSGTS-SPTNSLVG 940
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 1.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 142 IVLPCVTIAATIITMWRFPP 83
+++PCV IA+ + + PP
Sbjct: 238 LIVPCVLIASMAVLGFTLPP 257
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.4 bits (43), Expect = 1.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 80 SPGTFHRVSMSYKNSHVTPKVELV 9
+PG +SM ++ +H+T V LV
Sbjct: 200 TPGHAAFISMRHRGAHITDIVVLV 223
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 20.2 bits (40), Expect = 4.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 29 SHASSCNSYSPCGKSPE 79
++A NS SP G SP+
Sbjct: 54 NYAQQHNSPSPTGSSPQ 70
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 20.2 bits (40), Expect = 4.3
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -1
Query: 134 PLRHHRCYHHND 99
P + H+ YHH D
Sbjct: 157 PRQSHQSYHHMD 168
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 20.2 bits (40), Expect = 4.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 198 FGSNEMGLTRFRKPIKIK 251
F +G RFRKP+ I+
Sbjct: 67 FAKPPIGPLRFRKPLPIE 84
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 20.2 bits (40), Expect = 4.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 198 FGSNEMGLTRFRKPIKIK 251
F +G RFRKP+ I+
Sbjct: 67 FAKPPIGPLRFRKPLPIE 84
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 19.8 bits (39), Expect = 5.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 139 VLPCVTIAATIITMWRFP 86
+L V +A + +WRFP
Sbjct: 29 ILSVVGLAIGLGNLWRFP 46
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 19.8 bits (39), Expect = 5.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 139 VLPCVTIAATIITMWRFP 86
+L V +A + +WRFP
Sbjct: 82 ILSVVGLAIGLGNLWRFP 99
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 19.4 bits (38), Expect = 7.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 54 THPVESPRRRGGKRHIVMMVAAM 122
T P+ RRR KR +M+ A+
Sbjct: 141 TQPLIYSRRRRSKRLAGLMIVAV 163
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 19.4 bits (38), Expect = 7.4
Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +2
Query: 110 GSS-DGDAGEDNSRTLSSPS 166
GSS D+GE+NSR S S
Sbjct: 382 GSSVHSDSGENNSRGHSGQS 401
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 19.4 bits (38), Expect = 7.4
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = -3
Query: 102 RCGAFRLVSGDFPQGEYELQELACDPES*TGW 7
+C + ++ PQG L + A S T W
Sbjct: 750 QCASTTTITARSPQGSQGLLQCATSNYSTTRW 781
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,884
Number of Sequences: 438
Number of extensions: 1511
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 4636803
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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