Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30b17
(377 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 25 0.19
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 25 0.19
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 25 0.19
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 25 0.19
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 24 0.58
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 4.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 4.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 4.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 4.1
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 20 9.5
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 20 9.5
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 20 9.5
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 20 9.5
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 25.4 bits (53), Expect = 0.19
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 254 LLSQPGCWSTSSITATSNKIITKKYVVYSVLSK 352
+L PGC+S A +K + KKY S +K
Sbjct: 224 VLCSPGCFSLFRGKALMDKSVMKKYTTRSTQAK 256
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 25.4 bits (53), Expect = 0.19
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 254 LLSQPGCWSTSSITATSNKIITKKYVVYSVLSK 352
+L PGC+S A +K + KKY S +K
Sbjct: 538 VLCSPGCFSLFRGKALMDKSVMKKYTTRSTQAK 570
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 25.4 bits (53), Expect = 0.19
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 254 LLSQPGCWSTSSITATSNKIITKKYVVYSVLSK 352
+L PGC+S A +K + KKY S +K
Sbjct: 771 VLCSPGCFSLFRGKALMDKSVMKKYTTRSTQAK 803
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 25.4 bits (53), Expect = 0.19
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 254 LLSQPGCWSTSSITATSNKIITKKYVVYSVLSK 352
+L PGC+S A +K + KKY S +K
Sbjct: 771 VLCSPGCFSLFRGKALMDKSVMKKYTTRSTQAK 803
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 23.8 bits (49), Expect = 0.58
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 109 IRNLLRANNQIFKNVAQQRNMSVICTPPRNKVSR 210
+RNL + F+NVA+ R + + C N + R
Sbjct: 207 LRNLDKIVTNGFRNVAESRKIFIECIEQYNVILR 240
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 4.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 254 LLSQPGCWSTSSITATSNKIITKKYVVYS 340
+L PGC+S A + + KKY S
Sbjct: 798 VLCSPGCFSLFRGKALMDDNVMKKYTTSS 826
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 4.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 254 LLSQPGCWSTSSITATSNKIITKKYVVYS 340
+L PGC+S A + + KKY S
Sbjct: 798 VLCSPGCFSLFRGKALMDDNVMKKYTTSS 826
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 4.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 254 LLSQPGCWSTSSITATSNKIITKKYVVYS 340
+L PGC+S A + + KKY S
Sbjct: 798 VLCSPGCFSLFRGKALMDDNVMKKYTTSS 826
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 4.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 254 LLSQPGCWSTSSITATSNKIITKKYVVYS 340
+L PGC+S A + + KKY S
Sbjct: 798 VLCSPGCFSLFRGKALMDDNVMKKYTTSS 826
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 19.8 bits (39), Expect = 9.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -3
Query: 333 TTYFFVIILLLVAVMLDVDQHPGW 262
T Y+F+ + LL+ ++ V + W
Sbjct: 318 TVYYFISLGLLILRLVSVCFYGSW 341
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 71 TSKNNCTKTKCLELG 115
T+ +CT+T C+ G
Sbjct: 22 TNDEDCTETSCMNGG 36
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -3
Query: 246 HHHQAGEEDH 217
HHH AG H
Sbjct: 322 HHHHAGHHIH 331
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 6 TSLNH*LIDFHCQFYIKKFETTLR 77
+SL+ +DF FY ++F T R
Sbjct: 77 SSLSEVKMDFTLDFYFRQFWTDPR 100
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,739
Number of Sequences: 336
Number of extensions: 1698
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 7803226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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