Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30b17
         (377 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118790-1|AAM50650.1|   68|Drosophila melanogaster GH15688p pro...    43   2e-04
AE014296-3570|AAF51742.1|   68|Drosophila melanogaster CG7181-PA...    43   2e-04
AF181636-1|AAD55422.1|  682|Drosophila melanogaster BcDNA.GH0726...    28   3.5  
AE014134-2078|AAS64682.1|  682|Drosophila melanogaster CG31705-P...    28   3.5  
AE014134-2077|AAS64681.1|  682|Drosophila melanogaster CG31705-P...    28   3.5  
AE014134-2076|AAF53106.2|  682|Drosophila melanogaster CG31705-P...    28   3.5  
BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p pro...    27   8.0  
AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA ...    27   8.0  

>AY118790-1|AAM50650.1|   68|Drosophila melanogaster GH15688p
           protein.
          Length = 68

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +1

Query: 145 KNVAQQRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLVNIKHYR 297
           ++  Q R  SV+  PP  ++S  E + L G M      IPAWVL +I+ Y+
Sbjct: 15  RSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65


>AE014296-3570|AAF51742.1|   68|Drosophila melanogaster CG7181-PA
           protein.
          Length = 68

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +1

Query: 145 KNVAQQRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLVNIKHYR 297
           ++  Q R  SV+  PP  ++S  E + L G M      IPAWVL +I+ Y+
Sbjct: 15  RSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65


>AF181636-1|AAD55422.1|  682|Drosophila melanogaster BcDNA.GH07269
           protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 225 PRRPDGGGLVCYPSLGVGQHQALPRQAIKLSQ 320
           P  P GGG++C P    G     P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568


>AE014134-2078|AAS64682.1|  682|Drosophila melanogaster CG31705-PC,
           isoform C protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 225 PRRPDGGGLVCYPSLGVGQHQALPRQAIKLSQ 320
           P  P GGG++C P    G     P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568


>AE014134-2077|AAS64681.1|  682|Drosophila melanogaster CG31705-PB,
           isoform B protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 225 PRRPDGGGLVCYPSLGVGQHQALPRQAIKLSQ 320
           P  P GGG++C P    G     P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568


>AE014134-2076|AAF53106.2|  682|Drosophila melanogaster CG31705-PA,
           isoform A protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 225 PRRPDGGGLVCYPSLGVGQHQALPRQAIKLSQ 320
           P  P GGG++C P    G     P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568


>BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p
           protein.
          Length = 1000

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 18/76 (23%), Positives = 35/76 (46%)
 Frame = -3

Query: 351 LLRTE*TTYFFVIILLLVAVMLDVDQHPGWDSRPAHHHQAGEEDHLTSGNLVSWRSADNA 172
           ++R     Y   +I L++ +M D+D    W +         ++DH +  N+++  S D  
Sbjct: 293 MIRKRADKYIVALIPLILHMMTDLDDDENWSTADV----VDDDDH-SDNNVIAESSLDRL 347

Query: 171 HVPLLSDILKDLVVSA 124
              L   I+  LV++A
Sbjct: 348 ACGLGGKIVLPLVMNA 363


>AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA
           protein.
          Length = 1105

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 18/76 (23%), Positives = 35/76 (46%)
 Frame = -3

Query: 351 LLRTE*TTYFFVIILLLVAVMLDVDQHPGWDSRPAHHHQAGEEDHLTSGNLVSWRSADNA 172
           ++R     Y   +I L++ +M D+D    W +         ++DH +  N+++  S D  
Sbjct: 293 MIRKRADKYIVALIPLILHMMTDLDDDENWSTADV----VDDDDH-SDNNVIAESSLDRL 347

Query: 171 HVPLLSDILKDLVVSA 124
              L   I+  LV++A
Sbjct: 348 ACGLGGKIVLPLVMNA 363


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,349,616
Number of Sequences: 53049
Number of extensions: 293241
Number of successful extensions: 988
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)