Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30b16
         (655 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4812 Cluster: PREDICTED: similar to ENSANGP000...    37   0.49 
UniRef50_UPI0000D56592 Cluster: PREDICTED: similar to CG3419-PA,...    36   0.64 
UniRef50_UPI000051AB2C Cluster: PREDICTED: similar to CG3419-PA,...    35   2.0  

>UniRef50_UPI00015B4812 Cluster: PREDICTED: similar to
           ENSANGP00000012576; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000012576 - Nasonia
           vitripennis
          Length = 667

 Score = 36.7 bits (81), Expect = 0.49
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +3

Query: 462 REPRFIIPVLVPLIYLYGNHLHPNESNGINYRRLK 566
           +EPRFI+PV++PLI+L+ +++   E   +N    K
Sbjct: 409 QEPRFILPVILPLIFLFSHYIKCPEVGAVNVANKK 443


>UniRef50_UPI0000D56592 Cluster: PREDICTED: similar to CG3419-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG3419-PA, isoform A - Tribolium castaneum
          Length = 638

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 462 REPRFIIPVLVPLIYLYGNHLHPNESN 542
           +EPRF+IP+++PL+YL  N + P   N
Sbjct: 391 QEPRFLIPLILPLVYLSTNSVFPESDN 417


>UniRef50_UPI000051AB2C Cluster: PREDICTED: similar to CG3419-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG3419-PA, isoform A - Apis mellifera
          Length = 592

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 14/30 (46%), Positives = 24/30 (80%)
 Frame = +3

Query: 462 REPRFIIPVLVPLIYLYGNHLHPNESNGIN 551
           +EPRFIIP L+PL +LY  ++  N+++G++
Sbjct: 409 QEPRFIIPTLLPLTFLYAPNI--NQTSGVD 436


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,604,756
Number of Sequences: 1657284
Number of extensions: 10290846
Number of successful extensions: 18314
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18309
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)