Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30b03
(505 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 190 2e-47
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 179 3e-44
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 168 7e-41
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 136 3e-31
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 136 4e-31
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 124 1e-27
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 122 6e-27
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 120 2e-26
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 111 7e-24
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 107 1e-22
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 95 8e-19
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 84 2e-15
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 83 3e-15
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 83 5e-15
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 77 2e-13
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 75 1e-12
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 73 5e-12
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 65 1e-09
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 59 5e-08
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 57 3e-07
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 52 6e-06
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 52 1e-05
UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23; Bacter... 52 1e-05
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 51 1e-05
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 50 2e-05
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 49 7e-05
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 49 7e-05
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 48 9e-05
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 47 2e-04
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 46 6e-04
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 46 6e-04
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 44 0.002
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 44 0.003
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 44 0.003
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 41 0.014
UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4; Mycopla... 39 0.056
UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2; Wolbach... 38 0.17
UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellu... 37 0.22
UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5; Bacteri... 37 0.30
UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10; ... 36 0.69
UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: Fli... 34 1.6
UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1; Fusoba... 34 2.1
UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycopla... 34 2.1
UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2; ... 33 3.7
UniRef50_Q5V488 Cluster: Ribosomal protein S10p; n=2; Halobacter... 32 6.4
UniRef50_P75581 Cluster: 30S ribosomal protein S10; n=2; Mycopla... 32 6.4
UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispa... 32 8.5
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 190 bits (462), Expect = 2e-47
Identities = 90/105 (85%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
Frame = +2
Query: 125 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 301
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 302 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 436
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEP
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEP 110
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 179 bits (436), Expect = 3e-44
Identities = 87/105 (82%), Positives = 93/105 (88%), Gaps = 1/105 (0%)
Frame = +2
Query: 125 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 301
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 302 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 436
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEP
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEP 108
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 168 bits (408), Expect = 7e-41
Identities = 78/101 (77%), Positives = 92/101 (91%)
Frame = +2
Query: 134 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 313
+K Q S +HRIRITLTSRNVR+LEKVC+DL+N AK ++LRVKGPVR+PTKIL+ITTRK
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILKITTRK 67
Query: 314 TPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 436
TP GEGSKTW+ ++MRIHKR+IDLHSPSEIVKQITSI+IEP
Sbjct: 68 TPNGEGSKTWETYEMRIHKRLIDLHSPSEIVKQITSIHIEP 108
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 136 bits (329), Expect = 3e-31
Identities = 63/70 (90%), Positives = 67/70 (95%)
Frame = +2
Query: 227 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIV 406
LI KKQKL+VKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDL+SPSEIV
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLYSPSEIV 462
Query: 407 KQITSINIEP 436
KQITSI++EP
Sbjct: 463 KQITSISLEP 472
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 136 bits (328), Expect = 4e-31
Identities = 66/110 (60%), Positives = 82/110 (74%)
Frame = +2
Query: 107 AAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 286
AA+++ K + PQ +S +R+TLT+ +++ LEKV LI AK Q LRVKGPVRMPT
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPT 59
Query: 287 KILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 436
K+LR+TTRKTPCGEGSKTWDRFQ+RIHKRVIDL S E Q+ I +EP
Sbjct: 60 KVLRVTTRKTPCGEGSKTWDRFQLRIHKRVIDLLSTDEATLQLKHIYLEP 109
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 124 bits (299), Expect = 1e-27
Identities = 57/104 (54%), Positives = 77/104 (74%)
Frame = +2
Query: 125 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRIT 304
KDI+ P I IT+TS V+++E +CA++ KK+ ++VKGPVR+PTK LRIT
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTKTLRIT 64
Query: 305 TRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 436
TRKTPCGEGSKTWD +QMRI+KRV+ + + E VK+ITS+ +EP
Sbjct: 65 TRKTPCGEGSKTWDHYQMRIYKRVLSMKTTPETVKEITSLKVEP 108
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 122 bits (293), Expect = 6e-27
Identities = 58/105 (55%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
Frame = +2
Query: 125 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK-QKLRVKGPVRMPTKILRI 301
K+ +K + EV + R+RITLT +N++S+EK +++++ AKK +++ VKGPVRMPTK L I
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVI 63
Query: 302 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 436
T RK+PCGEGSKTWDRF+MRI+KR+IDL VK IT+ I+P
Sbjct: 64 TVRKSPCGEGSKTWDRFEMRIYKRIIDLTCNVPDVKTITNFRIDP 108
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 120 bits (288), Expect = 2e-26
Identities = 50/100 (50%), Positives = 77/100 (77%)
Frame = +2
Query: 134 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 313
+K QA + +R+T+TSRN +++E V + L+ A+ +K+ + GPVR+PT+ L+ITTRK
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKITTRK 64
Query: 314 TPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIE 433
TPCG G+ TWD F+++I+KR+IDLH+P+E VK+ITS +E
Sbjct: 65 TPCGNGTNTWDTFELKIYKRIIDLHAPTEQVKKITSFTME 104
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 111 bits (268), Expect = 7e-24
Identities = 52/112 (46%), Positives = 76/112 (67%)
Frame = +2
Query: 101 MAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRM 280
MA VV D +K E P+ +IR+T+TS + +L++V +L+ KK L V+GP+ M
Sbjct: 1 MADRVVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPM 60
Query: 281 PTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 436
P + LRITTR+ PCG G++T+D F++RI+KRVID +E VKQ+T I +EP
Sbjct: 61 PRRRLRITTRRAPCGNGTETYDHFELRIYKRVIDFQGTAEAVKQVTQIALEP 112
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 107 bits (257), Expect = 1e-22
Identities = 43/88 (48%), Positives = 64/88 (72%)
Frame = +2
Query: 170 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 349
+RITLTS+++ SLEK C ++I K+ ++GP+R+PTK + + RK+PCGEG+ TWD+
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDK 75
Query: 350 FQMRIHKRVIDLHSPSEIVKQITSINIE 433
F+M+IHKR+ID HS IT IN++
Sbjct: 76 FEMKIHKRIIDFHSNKSEFNSITPINLD 103
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 95.1 bits (226), Expect = 8e-19
Identities = 51/107 (47%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
Frame = +2
Query: 134 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAK----KQKLRV--KGPVRMPTKIL 295
EK + +IR+ +TSR+ + LE +I + Q +V KGPVRMPTK L
Sbjct: 6 EKKVEDEQQTKKIRMIVTSRSAQDLENFTNQVIEKTRGIQRDQGAQVVFKGPVRMPTKHL 65
Query: 296 RITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 436
++T RK+PCGEGSKTWDRF+MRIHKRVID K IT+ I P
Sbjct: 66 KMTVRKSPCGEGSKTWDRFEMRIHKRVIDFQCTLPTFKDITNFKIGP 112
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 83.8 bits (198), Expect = 2e-15
Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = +2
Query: 125 KDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 301
KD K P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK+ ++
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKV-QL 62
Query: 302 TTRKTPCGEGSKTWD-RFQMRI 364
+ + C + W+ +FQ RI
Sbjct: 63 ESYISQC--AAVCWESKFQHRI 82
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 83.4 bits (197), Expect = 3e-15
Identities = 32/86 (37%), Positives = 61/86 (70%)
Frame = +2
Query: 173 RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRF 352
R+ LTS N+ L+ VC +++ K+ +R+KGP +P K L I TRK+PCG G++T++++
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKW 65
Query: 353 QMRIHKRVIDLHSPSEIVKQITSINI 430
+MR+H+R+ID+ + + ++++ + I
Sbjct: 66 EMRMHRRIIDISADDKTIRRLIDLKI 91
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 82.6 bits (195), Expect = 5e-15
Identities = 36/91 (39%), Positives = 59/91 (64%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
+ RI L+ N R L+++C+ + A K + + GPV +PT+ + + RK P GEGS+TWD
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWD 66
Query: 347 RFQMRIHKRVIDLHSPSEIVKQITSINIEPR 439
++MR+HKR+ID+ + ++QI I + PR
Sbjct: 67 HWEMRVHKRLIDISADERALRQIMRIQV-PR 96
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 77.4 bits (182), Expect = 2e-13
Identities = 34/92 (36%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +2
Query: 158 PIHRI-RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGS 334
P+ RI RI + N S++ + D+ AKK ++V+GP+ +PT+ L +T R+ P G+G
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTRRLMVTVRRAPSGQGY 77
Query: 335 KTWDRFQMRIHKRVIDLHSPSEIVKQITSINI 430
T+D ++MRIHKRV+D+ + ++Q+ + I
Sbjct: 78 HTYDHWEMRIHKRVVDMDADERALRQLMRLRI 109
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 74.5 bits (175), Expect = 1e-12
Identities = 34/91 (37%), Positives = 59/91 (64%)
Frame = +2
Query: 158 PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 337
P + RI + S +V+S+E+V + A++ + V+GPV +P K L I+T + P GEG+K
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVKRLEISTLRLPHGEGTK 62
Query: 338 TWDRFQMRIHKRVIDLHSPSEIVKQITSINI 430
+D ++MRIHKR+ID+ ++++ I I +
Sbjct: 63 VFDHWEMRIHKRLIDVELNDKVMRNIMRIRV 93
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 72.5 bits (170), Expect = 5e-12
Identities = 29/88 (32%), Positives = 54/88 (61%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
+ RI L S N+ SL V + N A+K ++V GP+ +PT + + + P GEG K W+
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWE 63
Query: 347 RFQMRIHKRVIDLHSPSEIVKQITSINI 430
++M++HKR+ID+ + +++Q+ + +
Sbjct: 64 HWEMKVHKRIIDIAADERVMRQLMRVRV 91
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 64.9 bits (151), Expect = 1e-09
Identities = 27/80 (33%), Positives = 49/80 (61%)
Frame = +2
Query: 170 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 349
+RI + S ++ L +V + K+ ++++GP+ +PTKILR+ + G+K WD
Sbjct: 4 LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDT 63
Query: 350 FQMRIHKRVIDLHSPSEIVK 409
+QMRIH+R+ID+ + +K
Sbjct: 64 YQMRIHRRIIDIATDDRTIK 83
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 59.3 bits (137), Expect = 5e-08
Identities = 24/66 (36%), Positives = 42/66 (63%)
Frame = +2
Query: 176 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQ 355
I + ++++ +E+ ++ + + GP R P + L ITTRK+PCGEG+ TW RF+
Sbjct: 27 IIVVGKDLKLVERYVKSIVKEGRA--FGISGPCRAPVRRLTITTRKSPCGEGTNTWHRFE 84
Query: 356 MRIHKR 373
+R++KR
Sbjct: 85 LRMYKR 90
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 56.8 bits (131), Expect = 3e-07
Identities = 28/93 (30%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Frame = +2
Query: 161 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKT 340
+ RIR+ L + + R L++ A ++ K+ ++GP+ MPTKI R T K+P +
Sbjct: 1 MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSP-HINKDS 59
Query: 341 WDRFQMRIHKRVIDLHSPS-EIVKQITSINIEP 436
++F++RIH R++D+ + + + V +T +++ P
Sbjct: 60 REQFEIRIHARMLDIVAATPDTVDSLTKLDLAP 92
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 52.4 bits (120), Expect = 6e-06
Identities = 25/89 (28%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
+IRI L + + + L++ +++ A++ +V GP+ +PT+I R T ++P + K+ +
Sbjct: 5 KIRIRLKAFDHKLLDQSTKEIVETARRTGAKVAGPIPLPTRINRYTVLRSPHVD-KKSRE 63
Query: 347 RFQMRIHKRVIDLHSPS-EIVKQITSINI 430
+F++R HKR++D+ P+ + V Q+ +++
Sbjct: 64 QFEVRTHKRMLDILEPTQQTVDQLMKLDL 92
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 51.6 bits (118), Expect = 1e-05
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = +2
Query: 143 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 322
QA +IRI L S ++ C ++ AK + RV GPV +PTK ++P
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTKRRIFCVLRSP- 89
Query: 323 GEGSKTWDRFQMRIHKRVIDLHSPS 397
+ + F+ R H R+ID+H P+
Sbjct: 90 HVNKDSREHFETRTHHRLIDVHQPT 114
>UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Rickettsia
felis (Rickettsia azadi)
Length = 105
Score = 51.6 bits (118), Expect = 1e-05
Identities = 24/81 (29%), Positives = 49/81 (60%)
Frame = +2
Query: 164 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 343
++I+I L S + RSL++ ++++ K+ + GP+ +P KI R T ++P K+
Sbjct: 3 NKIKIRLKSFDHRSLDQATKEIVSAVKRTFANINGPIPLPRKIERFTVNRSP-HVHKKSR 61
Query: 344 DRFQMRIHKRVIDLHSPSEIV 406
++F++R HKR++ + P+ V
Sbjct: 62 EQFEIRKHKRLLVIDDPNPAV 82
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/78 (33%), Positives = 46/78 (58%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
RIRI L + + R +++ D++ AK+ +V GP+ +PTK R T +P D
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTKKERFTILVSP-HVNKDARD 63
Query: 347 RFQMRIHKRVIDLHSPSE 400
++++R HKR+ID+ P++
Sbjct: 64 QYEIRTHKRLIDIVDPTD 81
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/77 (29%), Positives = 46/77 (59%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
+IRI L + R L++ D++ AK+ + GP+ +PT + T ++P K+ +
Sbjct: 14 KIRIRLKGYDQRLLDRSTGDIVETAKRTGAAIAGPIPLPTSCEKFTVLRSP-NIDRKSRE 72
Query: 347 RFQMRIHKRVIDLHSPS 397
+F++R H+R+ID+ +P+
Sbjct: 73 QFEIRTHRRLIDILNPT 89
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 48.8 bits (111), Expect = 7e-05
Identities = 24/75 (32%), Positives = 45/75 (60%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
+IRI L S + L + +++ AK+ V GP+ +PT++ R T K+P + K+ +
Sbjct: 3 KIRIKLKSFDSGILHRSTKEIVMAAKRNGALVSGPIPLPTRVSRYTVNKSPHVD-KKSRE 61
Query: 347 RFQMRIHKRVIDLHS 391
+FQ+ +HK +++L S
Sbjct: 62 QFQLAVHKCLLELSS 76
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 48.8 bits (111), Expect = 7e-05
Identities = 25/78 (32%), Positives = 46/78 (58%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
RIRI L S + R +++ +++ AK+ +V GP+ MPT+I R +P D
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTRIERFNVLTSP-HVNKDARD 63
Query: 347 RFQMRIHKRVIDLHSPSE 400
++++R +KR+ID+ P++
Sbjct: 64 QYEIRTYKRLIDIVQPTD 81
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 48.4 bits (110), Expect = 9e-05
Identities = 29/98 (29%), Positives = 49/98 (50%)
Frame = +2
Query: 104 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 283
A+ V S I +++P +IRI L S V +E C +++ A+ + GPV +P
Sbjct: 73 ASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLP 132
Query: 284 TKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS 397
TK K+P + F++R H+R+ID+ P+
Sbjct: 133 TKKRIYCVLKSPHVHKDARF-HFEIRTHQRMIDILYPT 169
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/28 (71%), Positives = 26/28 (92%)
Frame = +2
Query: 353 QMRIHKRVIDLHSPSEIVKQITSINIEP 436
+M+IH ++IDL SPSEIVKQITS++IEP
Sbjct: 33 KMKIHNQLIDLQSPSEIVKQITSVSIEP 60
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 45.6 bits (103), Expect = 6e-04
Identities = 21/83 (25%), Positives = 43/83 (51%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
++ I + S + + KVC + K ++ +P K+ ITT + P G+G+K W
Sbjct: 20 KVCIDMASLEEKQINKVCREFYEYGKTFIDDLQRETVLPKKVESITTLRNPSGQGTKKWS 79
Query: 347 RFQMRIHKRVIDLHSPSEIVKQI 415
R++M +H R L + + ++++
Sbjct: 80 RYKMIVHLRNFYLEATHQQLEKV 102
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 45.6 bits (103), Expect = 6e-04
Identities = 23/77 (29%), Positives = 45/77 (58%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
+IRI L + R L++ ++ AK+ + GP+ +PT+ T ++P + + +
Sbjct: 5 KIRIRLKAYEHRILDQSADKIVETAKRTGATISGPIPLPTERTIYTVLRSP-HKFKDSRE 63
Query: 347 RFQMRIHKRVIDLHSPS 397
+F+MR HKR+ID+ +P+
Sbjct: 64 QFEMRTHKRLIDIVNPT 80
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 44.0 bits (99), Expect = 0.002
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
+IRI L + + R L+ C +I A + GP+ +PTK ++P + +
Sbjct: 9 KIRIRLKAFDRRMLDLSCDKIIETADQTAATAIGPIPLPTKRKIYCVLRSPHVDKDSR-E 67
Query: 347 RFQMRIHKRVIDLHSPS 397
F+ R H+R+ID++SPS
Sbjct: 68 HFETRTHRRIIDIYSPS 84
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
+IRI L + + R L++ ++ AK+ V GP+ +PT+ I T + + +
Sbjct: 5 KIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTE-KSIYTVLRAVHKYKDSRE 63
Query: 347 RFQMRIHKRVIDLHSPS 397
+F+MR HKR+ID+ +P+
Sbjct: 64 QFEMRTHKRLIDIVNPT 80
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
++RI L+S + L C +++ K+ VKGPV +PT+ ++P + +
Sbjct: 12 KVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTRRRVYCVLRSP-HVNKDSRE 70
Query: 347 RFQMRIHKRVIDLHS-PSEIVKQITSINI 430
F++R H R+ID+ S SE ++ + +++
Sbjct: 71 HFEIRSHFRIIDISSCSSETIEMLMRLDL 99
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 41.1 bits (92), Expect = 0.014
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 161 IHRIRITLTSRNVRSLEKVCADLI-NGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 337
I + + L S ++ L+ CA ++ N Q L++ GP+ +PTKI +IT ++P + K
Sbjct: 3 ITKCSLHLKSFDLDVLKDSCALILKNKINLQNLKLTGPINLPTKIKKITVLRSPHID-KK 61
Query: 338 TWDRFQMRIHKRVIDLHS 391
+ ++F++R + + I + S
Sbjct: 62 SREQFEIRTYTKTIQIES 79
>UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
penetrans
Length = 102
Score = 39.1 bits (87), Expect = 0.056
Identities = 23/83 (27%), Positives = 46/83 (55%)
Frame = +2
Query: 164 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 343
+ ++I L S + R L++ +I ++ +VKGP+ +PTK T ++P +
Sbjct: 3 NEMKIKLFSYDHRLLDQSVRKIIKSSQDSGAKVKGPIPLPTKKEIFTICRSP-HVNKTSR 61
Query: 344 DRFQMRIHKRVIDLHSPSEIVKQ 412
++F+ R H+R+I L + +E K+
Sbjct: 62 EQFERRTHQRLIILLNTTEKTKE 84
>UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2;
Wolbachia|Rep: 30S ribosomal protein S10 - Wolbachia
pipientis wMel
Length = 109
Score = 37.5 bits (83), Expect = 0.17
Identities = 20/82 (24%), Positives = 43/82 (52%)
Frame = +2
Query: 170 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 349
I I + + + LE+ I+ K+ ++ GP+ +P K + ++P + K+ ++
Sbjct: 5 IYINIKAFDCSLLEECVRKFIDELKRSSAKLSGPIALPRKDSKFIVNRSPHVD-KKSREQ 63
Query: 350 FQMRIHKRVIDLHSPSEIVKQI 415
F+MR +R+I LH + + Q+
Sbjct: 64 FEMRTSRRLIVLHDLTPTMMQM 85
>UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellular
organisms|Rep: 30S ribosomal protein S10 - Bacteroides
thetaiotaomicron
Length = 101
Score = 37.1 bits (82), Expect = 0.22
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
+IRI L S + ++K ++ K V GP+ +PT RI T K+ +
Sbjct: 4 KIRIKLKSYDHNLVDKSAEKIVRTVKATGAIVSGPIPLPTH-KRIFTVNRSTFVNKKSRE 62
Query: 347 RFQMRIHKRVIDLHS 391
+F++ +KR+ID++S
Sbjct: 63 QFELSSYKRLIDIYS 77
>UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5;
Bacteria|Rep: 30S ribosomal protein S10 - Onion yellows
phytoplasma
Length = 107
Score = 36.7 bits (81), Expect = 0.30
Identities = 20/90 (22%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +2
Query: 170 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 349
I+I L + + +++ +I+ K ++GP+ +PT+ T ++P + ++
Sbjct: 9 IKIILRAYDHHLIDQSAKKIIDILTKTGANIEGPIPLPTRKEVFTVLRSPF-VNKDSREQ 67
Query: 350 FQMRIHKRVIDLHSPS-EIVKQITSINIEP 436
F+ R HKR+I + +P+ + ++ + I++ P
Sbjct: 68 FERRTHKRLIQIINPNKKTIESLMHISLPP 97
>UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10;
n=3; Bacillariophyta|Rep: Chloroplast 30S ribosomal
protein S10 - Phaeodactylum tricornutum
Length = 107
Score = 35.5 bits (78), Expect = 0.69
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +2
Query: 167 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 346
+IR+ L S N L C ++N + G + +PT+ ++P + +
Sbjct: 8 KIRVRLESFNHELLNSSCQKIVNILQNTLSNSIGVITLPTRKRIYCVLRSPHVDKDSR-E 66
Query: 347 RFQMRIHKRVIDLHSPSEI 403
F++R HKR+++++ SE+
Sbjct: 67 HFEIRTHKRILEIYYNSEV 85
>UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: FliF
protein - Bradyrhizobium japonicum
Length = 519
Score = 34.3 bits (75), Expect = 1.6
Identities = 21/86 (24%), Positives = 41/86 (47%)
Frame = +2
Query: 134 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 313
E P+ S + R+R L ++ +R++ + A +NG K Q++ + T +
Sbjct: 142 EAPEPSASIVVRVRGALEAQQIRAIRHLVASAVNGLKPQRVSIVDEAGQLLADGAATDPE 201
Query: 314 TPCGEGSKTWDRFQMRIHKRVIDLHS 391
G+ +T F+ R+ K+V D+ S
Sbjct: 202 QALGDERRT--TFEKRMRKQVEDIVS 225
>UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
SSU ribosomal protein S10P - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 78
Score = 33.9 bits (74), Expect = 2.1
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +2
Query: 278 MPTKILRITT-RKTPCGEGSKTWDRFQMRIHKRVIDL-HSPSEIVKQITSINIEPRC 442
+PT+I + T R + S+ ++F+MR+H+R+I+L +S + + +TS+++ C
Sbjct: 3 LPTRIRKYTVLRSLHVNKDSR--EQFEMRVHRRMIELVNSTDKAISSLTSVHLPSWC 57
>UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S10 -
Mycoplasma hyopneumoniae (strain 232)
Length = 106
Score = 33.9 bits (74), Expect = 2.1
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +2
Query: 170 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 349
I+I L S + R ++ +I A++ + +GPV +PT I T K+ ++
Sbjct: 6 IKIKLKSFDHRQIDAAAKKIILLARELNIETRGPVPLPTS-RAIYTILRSVHINKKSREQ 64
Query: 350 FQMRIHKRVIDL 385
F+ R HKR++ L
Sbjct: 65 FESRTHKRLVIL 76
>UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2;
Burkholderia ambifaria|Rep: Putative uncharacterized
protein - Burkholderia ambifaria MC40-6
Length = 325
Score = 33.1 bits (72), Expect = 3.7
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +3
Query: 66 KLFISAGIQQATWQPL*CQAKTSRNPRQRSPLFTASGSLLLLAMCAHSRRSV 221
+ FI+AGI TWQPL T+R P + F+ G+L LLA A R S+
Sbjct: 231 RTFIAAGIHPETWQPL----ATARRPAMIA--FSIIGALGLLAFWAWGRMSL 276
>UniRef50_Q5V488 Cluster: Ribosomal protein S10p; n=2;
Halobacteriaceae|Rep: Ribosomal protein S10p -
Haloarcula marismortui (Halobacterium marismortui)
Length = 138
Score = 32.3 bits (70), Expect = 6.4
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +2
Query: 176 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQ 355
+T TS + LE ++ A+++ + +KGP + LRI K+ +G + +D +
Sbjct: 35 LTFTSGDRHRLEDTVTEIKQSAEQKGVELKGPHPKQPQELRIPQSKSLGPDGGR-FDSWT 93
Query: 356 MRIHKRVIDLHSPSEIVKQIT 418
++ R I++ E + +T
Sbjct: 94 HTVYTRTIEIVGYEEFARDVT 114
>UniRef50_P75581 Cluster: 30S ribosomal protein S10; n=2;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
pneumoniae
Length = 108
Score = 32.3 bits (70), Expect = 6.4
Identities = 19/72 (26%), Positives = 39/72 (54%)
Frame = +2
Query: 170 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 349
++I L S + L+ ++ K +++KGP+ +PTK IT ++P + + ++
Sbjct: 12 LKIKLESYDSTLLDLTTKKIVEVVKGVDVKIKGPLPLPTKKEVITIIRSPHVDKASR-EQ 70
Query: 350 FQMRIHKRVIDL 385
F+ HKR++ L
Sbjct: 71 FEKNRHKRLMIL 82
>UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-128 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 226
Score = 31.9 bits (69), Expect = 8.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 275 RMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRV 376
R+P ++ + +TPC S W+R ++R+H RV
Sbjct: 8 RLPLRVY-VDEAETPCWRASADWERGELRLHYRV 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,100,237
Number of Sequences: 1657284
Number of extensions: 10672020
Number of successful extensions: 24210
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 23696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24192
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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