BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30a22
(696 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY324309-1|AAQ89694.1| 160|Anopheles gambiae insulin-like pepti... 27 0.75
AY324313-1|AAQ89698.1| 160|Anopheles gambiae insulin-like pepti... 26 0.99
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 25 3.0
CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 24 4.0
DQ518577-1|ABF66619.1| 318|Anopheles gambiae putative secreted ... 24 5.3
EF519467-1|ABP73543.1| 165|Anopheles gambiae CTLMA2 protein. 23 9.2
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 23 9.2
>AY324309-1|AAQ89694.1| 160|Anopheles gambiae insulin-like peptide
3 precursor protein.
Length = 160
Score = 26.6 bits (56), Expect = 0.75
Identities = 17/78 (21%), Positives = 31/78 (39%)
Frame = +3
Query: 210 YCSSTDNGPNESDEQPAVDPTKDRTKVIPVEQSLRYLASKAYMHTYGENPVWLLYRRNHK 389
+ ++ DN D+Q D +P ++ Y + Y H G N + R ++
Sbjct: 74 WMNAEDNTQQILDQQLQSVGMPDDRAAVPAWMNMVYPTNYMYRHGAGHNELIPARFRKNR 133
Query: 390 GGIPPRKTRKSCVRNGMI 443
GGI + C N ++
Sbjct: 134 GGIVEECCLRPCGMNQLL 151
>AY324313-1|AAQ89698.1| 160|Anopheles gambiae insulin-like peptide
6 precursor protein.
Length = 160
Score = 26.2 bits (55), Expect = 0.99
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = +3
Query: 225 DNGPNESDEQPAVDPTKDRTKVIPVEQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPP 404
DN D+Q D +P ++ Y ++ Y H G N + R ++GGI
Sbjct: 79 DNTQQILDQQLQSVGMPDDRATVPAWMNMVYPSNYMYRHGAGHNELIPARFRKNRGGIVE 138
Query: 405 RKTRKSCVRNGMI 443
+ C N ++
Sbjct: 139 ECCLRPCGMNQLL 151
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 24.6 bits (51), Expect = 3.0
Identities = 9/32 (28%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = -2
Query: 149 EQCHFLQFQKLCLNVDLF*TNFLLYYF--ICK 60
E+ H+++FQK+C +++ ++ Y + +CK
Sbjct: 213 EREHYIEFQKVCRDIEYLTRLYVSYRYLQLCK 244
>CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein
protein.
Length = 615
Score = 24.2 bits (50), Expect = 4.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 543 QILQPSKTGLCQKKHKEL 596
QIL PS LCQ+ HK L
Sbjct: 329 QILPPSYDRLCQQCHKAL 346
>DQ518577-1|ABF66619.1| 318|Anopheles gambiae putative secreted
carbonic anhydrase protein.
Length = 318
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 231 HYLLMNNRIEEMILNQVEFYLTSNEAH*TVPFSSISETM 115
H+ NNR E +LN + + L + H + S+ E +
Sbjct: 131 HWGDKNNRGAEHVLNDIRYPLEMHIIHRNKKYKSVGEAL 169
>EF519467-1|ABP73543.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 9.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +3
Query: 267 PTKDRTKVIPVEQSLRYLASKAYMHTYG 350
P +++ IP+ ++ +L + AY H+ G
Sbjct: 31 PFEEKEYFIPISRTSDWLGAVAYCHSVG 58
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 23.0 bits (47), Expect = 9.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 444 STGNPCPICRDEYLVLDH 497
++ + CP C+DE +DH
Sbjct: 966 ASSSRCPACKDEDETVDH 983
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,466
Number of Sequences: 2352
Number of extensions: 14325
Number of successful extensions: 67
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -