Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30a22
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66524-2|CAA91421.1|  238|Caenorhabditis elegans Hypothetical pr...    94   1e-19
U50191-9|AAK31558.1|  139|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    30   1.8  
L23647-3|AAK67242.2|  183|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z74039-5|CAA98504.1|  479|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z50016-8|CAA90315.1|  393|Caenorhabditis elegans Hypothetical pr...    28   7.3  
U41508-8|AAG00026.4|  553|Caenorhabditis elegans Abnormal catech...    27   9.7  
U41508-7|AAP46273.2|  490|Caenorhabditis elegans Abnormal catech...    27   9.7  

>Z66524-2|CAA91421.1|  238|Caenorhabditis elegans Hypothetical
           protein T13H5.5 protein.
          Length = 238

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 46/134 (34%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
 Frame = +3

Query: 297 VEQSLRYLASKAYMHTYGENPVWLLYRRNHKGGI---PPRKTRKSCV-RNGMISTGNPCP 464
           + + + Y+ S+ Y   Y   P++  Y+RN KG     PP   R  C+ ++G  +  + CP
Sbjct: 54  IAEQISYMKSRGYAEAYKGLPIYRWYKRNIKGQSKLQPP--PRLFCIDKHGRFNLNHACP 111

Query: 465 ICRDEYLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYD 644
           +CRDEYL  D+RN  L++QF+++ T Q +   K+GLC++++  L   + +A + G +T+ 
Sbjct: 112 VCRDEYLYFDYRNPGLIEQFLADGTDQPIDILKSGLCREQYTLLRAQLLKAKEHGTITFG 171

Query: 645 VPFRVYDYSVYNKS 686
           V FR +DY  + KS
Sbjct: 172 VEFRNFDYRQWYKS 185


>U50191-9|AAK31558.1|  139|Caenorhabditis elegans Hypothetical
           protein T14B4.2 protein.
          Length = 139

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 19/49 (38%), Positives = 34/49 (69%)
 Frame = +3

Query: 489 LDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIERAWDQGLL 635
           LD++N++LLQQF+S ++G++     TGLC +  K+L+ AI ++   G +
Sbjct: 63  LDYKNSRLLQQFVSTFSGRVYDRHITGLCDENKKKLIEAIAKSRRAGFM 111


>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 135 KMALF-SVLRLRLNKTLPDLRSSLRFYCSSTDNGPNESDEQPAVDPTKDRTKVIPVEQ 305
           KM  F S+  +  ++  P+   +  +  S  ++GP ++  +PA  PT + T   PVE+
Sbjct: 75  KMPAFQSIASISTDRESPEDPGNSGYLASGAESGPKKTTSKPATTPTPEPT-TTPVEE 131


>Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical
           protein K08E7.5d protein.
          Length = 541

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 135 KMALF-SVLRLRLNKTLPDLRSSLRFYCSSTDNGPNESDEQPAVDPTKDRTKVIPVEQ 305
           KM  F S+  +  ++  P+   +  +  S  ++GP ++  +PA  PT + T   PVE+
Sbjct: 34  KMPAFQSIASISTDRESPEDPGNSGYLASGAESGPKKTTSKPATTPTPEPT-TTPVEE 90


>Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E7.5b protein.
          Length = 493

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 135 KMALF-SVLRLRLNKTLPDLRSSLRFYCSSTDNGPNESDEQPAVDPTKDRTKVIPVEQ 305
           KM  F S+  +  ++  P+   +  +  S  ++GP ++  +PA  PT + T   PVE+
Sbjct: 34  KMPAFQSIASISTDRESPEDPGNSGYLASGAESGPKKTTSKPATTPTPEPT-TTPVEE 90


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
           protein K08E7.5a protein.
          Length = 1221

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 135 KMALF-SVLRLRLNKTLPDLRSSLRFYCSSTDNGPNESDEQPAVDPTKDRTKVIPVEQ 305
           KM  F S+  +  ++  P+   +  +  S  ++GP ++  +PA  PT + T   PVE+
Sbjct: 34  KMPAFQSIASISTDRESPEDPGNSGYLASGAESGPKKTTSKPATTPTPEPT-TTPVEE 90


>L23647-3|AAK67242.2|  183|Caenorhabditis elegans Hypothetical
           protein ZC262.8 protein.
          Length = 183

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +3

Query: 459 CPICRDEYLV-LDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIERAWDQGL 632
           C +C     + L +++  +L+QF+ +  G +L    TGLC+K+   +   + +A+  GL
Sbjct: 68  CSLCTCNVPIKLTYKDVLILEQFMRD-DGTVLPRQLTGLCKKQQLRMERCVMQAFWSGL 125


>Z74039-5|CAA98504.1|  479|Caenorhabditis elegans Hypothetical
           protein K03B8.5 protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -3

Query: 193 LKSGRVLFNLKRSTLNSAIFFNFRNY-VLMLTYFKLISFF 77
           LK  R+L  +K S L   ++F+ +NY +L +++  L+ +F
Sbjct: 3   LKIFRLLLEIKSSILKICVYFSSKNYGILSISFAFLLIYF 42


>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
           protein H20J04.2 protein.
          Length = 1427

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 517 NNSFRIILDRFYNLQRQAYARKNTK 591
           N+ + I+ DRF+N +  AYA K+ K
Sbjct: 122 NDIYHILKDRFFNNEEVAYAEKSRK 146


>Z50016-8|CAA90315.1|  393|Caenorhabditis elegans Hypothetical
           protein T21C12.2 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +3

Query: 276 DRTKVIPVEQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPP 404
           D T+    + S+RY    A + TYGE    LL R+N++G   P
Sbjct: 119 DITEESDADGSIRY----ATLRTYGETDHTLLERKNYRGAFLP 157


>U41508-8|AAG00026.4|  553|Caenorhabditis elegans Abnormal
           catecholamine distributionprotein 1, isoform a protein.
          Length = 553

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 305 LFDWNNFGPVLSRINRWLLIGFIGSII 225
           L   N FGP+  RI RW L  FIG ++
Sbjct: 370 LIGTNIFGPLAHRIGRW-LSSFIGLVV 395


>U41508-7|AAP46273.2|  490|Caenorhabditis elegans Abnormal
           catecholamine distributionprotein 1, isoform b protein.
          Length = 490

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 305 LFDWNNFGPVLSRINRWLLIGFIGSII 225
           L   N FGP+  RI RW L  FIG ++
Sbjct: 307 LIGTNIFGPLAHRIGRW-LSSFIGLVV 332


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,188,460
Number of Sequences: 27780
Number of extensions: 323801
Number of successful extensions: 889
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)