Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30a09
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024809-4|AAF59543.1| 253|Caenorhabditis elegans Hypothetical ... 40 0.002
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 36 0.021
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 36 0.021
Z70307-14|CAA94338.2| 409|Caenorhabditis elegans Hypothetical p... 34 0.083
Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical pr... 33 0.19
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 33 0.19
Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical pr... 31 0.58
U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical p... 30 1.3
Z92826-8|CAI79117.1| 325|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81475-12|CAI79149.1| 325|Caenorhabditis elegans Hypothetical p... 30 1.8
Z81065-4|CAI79162.1| 176|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81038-18|CAI79154.1| 176|Caenorhabditis elegans Hypothetical p... 29 3.1
AF000263-18|AAG00019.1| 152|Caenorhabditis elegans Hypothetical... 29 3.1
AF000262-1|AAN60528.1| 152|Caenorhabditis elegans Hypothetical ... 29 3.1
Z79694-2|CAB01960.1| 173|Caenorhabditis elegans Hypothetical pr... 29 4.1
U40955-6|AAA81754.1| 539|Caenorhabditis elegans Hypothetical pr... 29 4.1
U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon gu... 29 4.1
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 29 4.1
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 29 4.1
AL034393-26|CAI59121.1| 936|Caenorhabditis elegans Hypothetical... 29 4.1
AL034393-25|CAI59120.1| 797|Caenorhabditis elegans Hypothetical... 29 4.1
AL034393-24|CAA22312.3| 833|Caenorhabditis elegans Hypothetical... 29 4.1
AC024880-9|AAK85515.1| 446|Caenorhabditis elegans Hypothetical ... 29 4.1
Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical pr... 28 5.4
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 5.4
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 5.4
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 5.4
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 5.4
Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical pr... 28 7.2
U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical p... 27 9.5
U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical p... 27 9.5
U39853-5|AAK39223.1| 231|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 27 9.5
AL132948-25|CAC51048.1| 438|Caenorhabditis elegans Hypothetical... 27 9.5
>AC024809-4|AAF59543.1| 253|Caenorhabditis elegans Hypothetical
protein Y53G8AR.6 protein.
Length = 253
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 117 TVSDVTKMKVVELRKELKSRGLSYAGDKAELIARLQAAI 233
+V+D K+ V L++EL SRGL G+K EL+ARL +I
Sbjct: 4 SVADAKKLTVPRLKEELASRGLDNTGNKPELLARLTESI 42
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 378 SEQSSTATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQI 557
S+QSS+A + E+K ++ +K+K N ++KDK N+ K S +S +
Sbjct: 200 SDQSSSAPASTESKKSKKIKKKKNKKSKDKKKSNSRKNK---KNKKSKGKSTSTSEPPTP 256
Query: 558 NEKSVEPKTASESNN 602
N+ +TA+E N
Sbjct: 257 NQPETGVQTANELRN 271
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +3
Query: 126 DVTKMKVVELRKELKSRGLSYAGDKAELIARLQAAI 233
D MKV ELR EL+ RGL G K L+ RLQ A+
Sbjct: 659 DPKSMKVAELRVELELRGLETKGIKTLLVQRLQTAL 694
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +3
Query: 126 DVTKMKVVELRKELKSRGLSYAGDKAELIARLQAAI 233
D MKV ELR EL+ RGL G K L+ RLQ A+
Sbjct: 659 DPKSMKVAELRVELELRGLETKGIKTLLVQRLQTAL 694
>Z70307-14|CAA94338.2| 409|Caenorhabditis elegans Hypothetical
protein C39E9.12 protein.
Length = 409
Score = 34.3 bits (75), Expect = 0.083
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 126 DVTKMKVVELRKELKSRGLSYAGDKAELIARLQAAIISQDEHTDINFEFDEMDSDGVFED 305
DV M +LRKELK + S AG K+EL +RL + Q+ + +E +++ + D
Sbjct: 12 DVLNMTCDKLRKELKKKRASTAGKKSELQSRLLEFLAGQNNAGNGEAIREEPEAEAMDTD 71
Query: 306 E 308
E
Sbjct: 72 E 72
>Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical
protein F40F9.10 protein.
Length = 502
Score = 33.1 bits (72), Expect = 0.19
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +3
Query: 360 NEDLVLSEQSSTA--TIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLNRPSSISLVS 533
NE L ++E+ T T VE K K+K A+ K+K+ ++A+ KK + R ++ ++S
Sbjct: 293 NEILDMTEKKKTPQKTEKVEKKVVAEKKKKP-ADGKEKTDKDAAPKKKKVLRQKTLPVLS 351
Query: 534 SKTVDDQINEKSVEPKTASESNNVIKINTD 623
+ D + +S TA ES+ + N++
Sbjct: 352 AVHEDSKPEVESTSIPTAPESDEPSENNSE 381
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 6 protein.
Length = 1254
Score = 33.1 bits (72), Expect = 0.19
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Frame = +3
Query: 378 SEQSSTATIAVETKSTRTLKRKTNAETKDKSAENA------SAKKIVLNRPSSISLVSSK 539
SE S+T + V+T S T + T AET SAE + SA I P + +L SS
Sbjct: 855 SEPSTTESTTVDTSSATTEESSTAAETTTTSAETSETTTSESAAFITGESPENTALQSSS 914
Query: 540 TVDDQINEKSVEPKTASESNNVIKINTDLDP 632
++ NE S E A K T + P
Sbjct: 915 QKSEE-NESSAEKPGARRDFVPKKHKTTVKP 944
>Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical
protein T06E6.1 protein.
Length = 431
Score = 31.5 bits (68), Expect = 0.58
Identities = 23/91 (25%), Positives = 41/91 (45%)
Frame = +3
Query: 273 DEMDSDGVFEDEEVKSQXXXXXXXXXXXXNEDLVLSEQSSTATIAVETKSTRTLKRKTNA 452
D+ D D V E+++V ++D V Q ++ TIAV +K+++ LKRK
Sbjct: 343 DDEDDDDVIEEDDVWG--VMEPVKRAKKSSDDDVEEIQITSETIAVPSKNSQKLKRKNVL 400
Query: 453 ETKDKSAENASAKKIVLNRPSSISLVSSKTV 545
E + E + + + + + L K V
Sbjct: 401 EADEIKEEEGDSDEAEVKKTTKKVLKKKKRV 431
>U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical
protein F26B1.1 protein.
Length = 304
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 363 EDLVLSEQSSTATIAVETKSTR-TLKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSK 539
E + +E T AV +ST+ T+ +TN + N A +RPS S V+S
Sbjct: 208 EPVQTTEAVEETTQAVVVESTQETVNAETNTPVDTPATNNVEATTEAASRPSLSSTVASN 267
Query: 540 --TVDDQINEKSVEPKTAS 590
+ DD + E S A+
Sbjct: 268 MTSADDLLGETSTNATKAA 286
>Z92826-8|CAI79117.1| 325|Caenorhabditis elegans Hypothetical
protein C18D11.7 protein.
Length = 325
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 614 YFNDIITFGCRFRLYRFFINLIINSFRTDK 525
YF + + CRFR+YR + L+ + RTD+
Sbjct: 191 YFTEFLLLACRFRMYRLLV-LLDDFSRTDE 219
>Z81475-12|CAI79149.1| 325|Caenorhabditis elegans Hypothetical
protein C18D11.7 protein.
Length = 325
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 614 YFNDIITFGCRFRLYRFFINLIINSFRTDK 525
YF + + CRFR+YR + L+ + RTD+
Sbjct: 191 YFTEFLLLACRFRMYRLLV-LLDDFSRTDE 219
>Z81065-4|CAI79162.1| 176|Caenorhabditis elegans Hypothetical
protein F16C3.4 protein.
Length = 176
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +3
Query: 387 SSTATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQINEK 566
SS + +++ T +K+ ++ + K N+ +KK N+P + ++ ++
Sbjct: 16 SSLLFLCGKSRITSRYDKKSRSKKQSKKRSNSFSKKF--NKPKVVGCQPTR------EDE 67
Query: 567 SVEPKTASESNNVIKINTDLDP--KKR 641
+EP+T +++N N DP KKR
Sbjct: 68 GIEPETRTKTNTASDENVQKDPSLKKR 94
>Z81038-18|CAI79154.1| 176|Caenorhabditis elegans Hypothetical
protein F16C3.4 protein.
Length = 176
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +3
Query: 387 SSTATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQINEK 566
SS + +++ T +K+ ++ + K N+ +KK N+P + ++ ++
Sbjct: 16 SSLLFLCGKSRITSRYDKKSRSKKQSKKRSNSFSKKF--NKPKVVGCQPTR------EDE 67
Query: 567 SVEPKTASESNNVIKINTDLDP--KKR 641
+EP+T +++N N DP KKR
Sbjct: 68 GIEPETRTKTNTASDENVQKDPSLKKR 94
>AF000263-18|AAG00019.1| 152|Caenorhabditis elegans Hypothetical
protein T08B2.12 protein.
Length = 152
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +3
Query: 363 EDLVLSEQSSTATIAVETKSTRTLK-RKTNAETKDKSAENASAKKIVLNRPSSISLVSSK 539
E + +E T AV ++T+ K +TNA +A N A +RPS S V+
Sbjct: 56 EPVQTTEAVEETTEAVVVEATQETKDAETNAPVDTPAANNIEATTEGASRPSLSSTVAPN 115
Query: 540 --TVDDQINEKSVEPKTAS 590
+VDD + E S A+
Sbjct: 116 VTSVDDLLGETSTNATKAA 134
>AF000262-1|AAN60528.1| 152|Caenorhabditis elegans Hypothetical
protein C48E7.7 protein.
Length = 152
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +3
Query: 363 EDLVLSEQSSTATIAVETKSTRTLK-RKTNAETKDKSAENASAKKIVLNRPSSISLVSSK 539
E + +E T AV ++T+ K +TNA +A N A +RPS S V+
Sbjct: 56 EPVQTTEAVEETTEAVVVEATQETKDAETNAPVDTPAANNIEATTEGASRPSLSSTVAPN 115
Query: 540 --TVDDQINEKSVEPKTAS 590
+VDD + E S A+
Sbjct: 116 VTSVDDLLGETSTNATKAA 134
>Z79694-2|CAB01960.1| 173|Caenorhabditis elegans Hypothetical
protein C15A11.2 protein.
Length = 173
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 423 TRTLKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQINEKSVE-PKTASESN 599
T+T K+KT+ T KS + K+ + V T +D E+ E PK +
Sbjct: 20 TKTAKKKTSTLTHSKSVTSTDPKEYEKEKRRDDKDVLRMTKEDVGKERKKEAPKKEQSKD 79
Query: 600 NVIKINTDLDPKKR 641
++K PK++
Sbjct: 80 QLVKEQPKEQPKEQ 93
>U40955-6|AAA81754.1| 539|Caenorhabditis elegans Hypothetical
protein F48B9.1 protein.
Length = 539
Score = 28.7 bits (61), Expect = 4.1
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +3
Query: 375 LSEQ-SSTATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDD 551
LSE S A+ V+TKS + K S+ N +++ +++NR ++ + V +
Sbjct: 407 LSETVSPAASPIVKTKSRKEKKTNQQMLKGSASSPNMNSQNLIINRKTTEADVENDKPKP 466
Query: 552 QINEKSVEPKTASESNNVIKINTDLDPKKRLELRAKRFGLPIKMS 686
N ++ E T S V+ ++ PKK + + AK G + S
Sbjct: 467 NTN-RTFEVVTVS----VVNVDFARKPKKSVYIMAKFDGKDVHRS 506
>U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform b protein.
Length = 714
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 375 LSEQSSTATIAVETKSTRTLKRKTNAE--TKDKSAENASAKKIVLNRPSSISLVSSKT 542
+SE+ S+ ++E +T +LKR A +DK SA + + PSS+SLV S++
Sbjct: 68 VSEEKSSEKPSIEVATT-SLKRYPPAHMRVRDKLVGILSASGLRIGLPSSVSLVFSRS 124
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 375 LSEQSSTATIAVETKSTRTLKRKTNAE--TKDKSAENASAKKIVLNRPSSISLVSSKT 542
+SE+ S+ ++E +T +LKR A +DK SA + + PSS+SLV S++
Sbjct: 2240 VSEEKSSEKPSIEVATT-SLKRYPPAHMRVRDKLVGILSASGLRIGLPSSVSLVFSRS 2296
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 375 LSEQSSTATIAVETKSTRTLKRKTNAE--TKDKSAENASAKKIVLNRPSSISLVSSKT 542
+SE+ S+ ++E +T +LKR A +DK SA + + PSS+SLV S++
Sbjct: 2268 VSEEKSSEKPSIEVATT-SLKRYPPAHMRVRDKLVGILSASGLRIGLPSSVSLVFSRS 2324
>AL034393-26|CAI59121.1| 936|Caenorhabditis elegans Hypothetical
protein Y18D10A.7c protein.
Length = 936
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +3
Query: 396 ATIAVETKSTRTLKRK-TNAETKDKSA--ENASAKKIVLNRPSSISLVSSKTVDDQINEK 566
A +A++ + LK T +T D + E AS ++++L S +S+ + + ++ NEK
Sbjct: 456 AVLALQGRREEDLKHSVTGMKTIDLDSDYETASTRQLLLKMGSRVSVKADEENNNNNNEK 515
Query: 567 SVE 575
S+E
Sbjct: 516 SIE 518
>AL034393-25|CAI59120.1| 797|Caenorhabditis elegans Hypothetical
protein Y18D10A.7b protein.
Length = 797
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +3
Query: 396 ATIAVETKSTRTLKRK-TNAETKDKSA--ENASAKKIVLNRPSSISLVSSKTVDDQINEK 566
A +A++ + LK T +T D + E AS ++++L S +S+ + + ++ NEK
Sbjct: 440 AVLALQGRREEDLKHSVTGMKTIDLDSDYETASTRQLLLKMGSRVSVKADEENNNNNNEK 499
Query: 567 SVE 575
S+E
Sbjct: 500 SIE 502
>AL034393-24|CAA22312.3| 833|Caenorhabditis elegans Hypothetical
protein Y18D10A.7a protein.
Length = 833
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +3
Query: 396 ATIAVETKSTRTLKRK-TNAETKDKSA--ENASAKKIVLNRPSSISLVSSKTVDDQINEK 566
A +A++ + LK T +T D + E AS ++++L S +S+ + + ++ NEK
Sbjct: 456 AVLALQGRREEDLKHSVTGMKTIDLDSDYETASTRQLLLKMGSRVSVKADEENNNNNNEK 515
Query: 567 SVE 575
S+E
Sbjct: 516 SIE 518
>AC024880-9|AAK85515.1| 446|Caenorhabditis elegans Hypothetical
protein Y97E10AR.6 protein.
Length = 446
Score = 28.7 bits (61), Expect = 4.1
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Frame = +3
Query: 375 LSEQSSTATIAVETKSTRTLKRKTNAETKD-KSAENASAKKIVLNRPSS-----ISLVSS 536
+++ + + + V+TKS + KRK ++ T KS+ ++ + +V+ P+S S+ S
Sbjct: 351 MNKSTLSEALNVDTKSPKKSKRKGSSGTSSKKSSPSSESSVVVVEEPTSPSQSEWSVCSE 410
Query: 537 KTVD-----DQINEKS-VEPKTASESNNVIKINTD 623
K V+ D+ +EK + P+ SE +N D
Sbjct: 411 KNVEEIPSNDEDDEKGPLTPRPESEKKEEGWVNWD 445
>Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical
protein T12G3.2c protein.
Length = 888
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +3
Query: 432 LKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQINEKSVEPKTASESNNVIK 611
LKR KD + A A+K+ ++ +++ +++ + + E V+P+ SES +
Sbjct: 668 LKRLQQKCLKDYLRDIADAEKVKYILTANEEVINIESLLESLKELGVKPENPSESREISS 727
Query: 612 INT---DLDPKKRLELRAKRFGL 671
T D+D + ++ A R +
Sbjct: 728 NITHMGDIDTMQHIKFTAMRIAV 750
>Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical
protein T12G3.2b protein.
Length = 912
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +3
Query: 432 LKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQINEKSVEPKTASESNNVIK 611
LKR KD + A A+K+ ++ +++ +++ + + E V+P+ SES +
Sbjct: 668 LKRLQQKCLKDYLRDIADAEKVKYILTANEEVINIESLLESLKELGVKPENPSESREISS 727
Query: 612 INT---DLDPKKRLELRAKRFGL 671
T D+D + ++ A R +
Sbjct: 728 NITHMGDIDTMQHIKFTAMRIAV 750
>Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical
protein T12G3.2a protein.
Length = 928
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +3
Query: 432 LKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDDQINEKSVEPKTASESNNVIK 611
LKR KD + A A+K+ ++ +++ +++ + + E V+P+ SES +
Sbjct: 668 LKRLQQKCLKDYLRDIADAEKVKYILTANEEVINIESLLESLKELGVKPENPSESREISS 727
Query: 612 INT---DLDPKKRLELRAKRFGL 671
T D+D + ++ A R +
Sbjct: 728 NITHMGDIDTMQHIKFTAMRIAV 750
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.3 bits (60), Expect = 5.4
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +3
Query: 417 KSTRTLKRKTNAETK-DKSAENASAKKIVLNRPSSISLVSSKTVDDQINEKSVEPKTASE 593
KS +T++ K + TK +KS E + +++ + S K EKS E A E
Sbjct: 1692 KSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAAEE 1751
Query: 594 SNNVIKINTDLDPKKRLELR----AKRFGLPIKMS 686
+ K + P+K E + K+ P+KM+
Sbjct: 1752 VKSPTK--KEKSPEKSAEEKPKSPTKKESSPVKMA 1784
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.3 bits (60), Expect = 5.4
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +3
Query: 417 KSTRTLKRKTNAETK-DKSAENASAKKIVLNRPSSISLVSSKTVDDQINEKSVEPKTASE 593
KS +T++ K + TK +KS E + +++ + S K EKS E A E
Sbjct: 1692 KSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAAEE 1751
Query: 594 SNNVIKINTDLDPKKRLELR----AKRFGLPIKMS 686
+ K + P+K E + K+ P+KM+
Sbjct: 1752 VKSPTK--KEKSPEKSAEEKPKSPTKKESSPVKMA 1784
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.3 bits (60), Expect = 5.4
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +3
Query: 417 KSTRTLKRKTNAETK-DKSAENASAKKIVLNRPSSISLVSSKTVDDQINEKSVEPKTASE 593
KS +T++ K + TK +KS E + +++ + S K EKS E A E
Sbjct: 1692 KSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAAEE 1751
Query: 594 SNNVIKINTDLDPKKRLELR----AKRFGLPIKMS 686
+ K + P+K E + K+ P+KM+
Sbjct: 1752 VKSPTK--KEKSPEKSAEEKPKSPTKKESSPVKMA 1784
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.3 bits (60), Expect = 5.4
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +3
Query: 417 KSTRTLKRKTNAETK-DKSAENASAKKIVLNRPSSISLVSSKTVDDQINEKSVEPKTASE 593
KS +T++ K + TK +KS E + +++ + S K EKS E A E
Sbjct: 1692 KSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAAEE 1751
Query: 594 SNNVIKINTDLDPKKRLELR----AKRFGLPIKMS 686
+ K + P+K E + K+ P+KM+
Sbjct: 1752 VKSPTK--KEKSPEKSAEEKPKSPTKKESSPVKMA 1784
>Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical
protein B0035.6 protein.
Length = 727
Score = 27.9 bits (59), Expect = 7.2
Identities = 25/88 (28%), Positives = 34/88 (38%)
Frame = +3
Query: 372 VLSEQSSTATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDD 551
VL E T A+ T K + A NA K+ R I S+TVD
Sbjct: 367 VLKEFPWTLEFAISTWFKALEVEKRRIPSAVYKAINAEMKETFDERTFDIE--ESETVDQ 424
Query: 552 QINEKSVEPKTASESNNVIKINTDLDPK 635
INE+ E + S + +K +D K
Sbjct: 425 SINEEDEERCSTLSSESSVKTAISIDHK 452
>Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical
protein T25B9.4 protein.
Length = 546
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
Frame = +3
Query: 231 IISQDEHTDINFEFDEMDSDGVFEDEEVKSQXXXXXXXXXXXXNEDLVLSEQSSTATIAV 410
++ ++E DI+ E + + + + + + L T++
Sbjct: 395 VLDENEKPDIDPESNRFNGNMPIRVDSSTKKMRNDTVCIPPPETATVALPNSLPPITVSA 454
Query: 411 ETKSTR--TLKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTV 545
+K++R TLKRK +KD S + P+ ++SS+T+
Sbjct: 455 RSKNSRKSTLKRKKKKTSKDSSMTTTTTNTNESEPPADGQVISSETM 501
>U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical
protein F36D4.5b protein.
Length = 315
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 111 DSTVSDVTKMKVVELRKELKSRGLSYAGDKAELIAR 218
+S V T+ ++RK +KS G + GD+ LI+R
Sbjct: 77 ESIVVGETERSTSDIRKLIKSLGEDFRGDRYHLISR 112
>U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical
protein F36D4.5a protein.
Length = 334
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 111 DSTVSDVTKMKVVELRKELKSRGLSYAGDKAELIAR 218
+S V T+ ++RK +KS G + GD+ LI+R
Sbjct: 96 ESIVVGETERSTSDIRKLIKSLGEDFRGDRYHLISR 131
>U39853-5|AAK39223.1| 231|Caenorhabditis elegans Hypothetical
protein F13B9.2 protein.
Length = 231
Score = 27.5 bits (58), Expect = 9.5
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 375 LSEQSSTATIA-VETKSTRTLKRKTNAETKDKSAENASAKKIVLNRPSSISLVSSKTVDD 551
L+ +TATI K KRKT + + K KK+ L R L+++
Sbjct: 83 LNNIENTATIIPASVKPIIPKKRKTKRKPRRKP------KKMHLRRVFKTRLITTTPRPV 136
Query: 552 QINEKSVEPKTASESNNVIKI 614
INE +E +T + NVI +
Sbjct: 137 SINEIRIEEETMETTTNVINL 157
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 384 QSSTATIAVETKSTRTLKRKTNAETKDKSAENASAKKIVLNRPSSI-SLVSSKTVDDQIN 560
+S + + E K +R + + KS E+ S K V + + +++K+V+ +
Sbjct: 427 ESISKPLEAEKKRSRRSSAYSGNSVESKSLESKSLDKEVEPKVRTARKSMAAKSVEPKTL 486
Query: 561 EKSVEPKTASES 596
EK EP SES
Sbjct: 487 EKDAEPSRKSES 498
>AL132948-25|CAC51048.1| 438|Caenorhabditis elegans Hypothetical
protein Y39B6A.33 protein.
Length = 438
Score = 27.5 bits (58), Expect = 9.5
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Frame = +3
Query: 288 DGVFEDEEVKSQXXXXXXXXXXXXNEDLVLSEQSSTATIAVETKSTRTLKRKTNAETKDK 467
D + + +KS+ +EDL + ++++TA V K T K +K
Sbjct: 27 DDIEDSIHIKSRQAATGGVISEMKDEDLFIVDRTATANKPVVPKLT-----KKQQAALEK 81
Query: 468 SAENASAKKIVLNRPSSISLVSSKTV----DDQINEKSVEPKT---ASESNNVIKINTDL 626
+N + + + L +PS+ S + K + I PK A++ N TDL
Sbjct: 82 ITKNITQEHVTLPKPSTTSKILKKPAKLPRGNAILALKKGPKAAAPAAKKKNFDVWTTDL 141
Query: 627 DPK 635
PK
Sbjct: 142 TPK 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,903,963
Number of Sequences: 27780
Number of extensions: 201694
Number of successful extensions: 826
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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