Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30a08
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.9  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   4.9  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 255 VAKVNKEFLDHVRHFIIRRPVIFRLVVFCGLCFIVAIGF 139
           +AK N         F IR+ +IF L+    + F++++ F
Sbjct: 727 IAKHNVRTFSAGGFFDIRKNLIFSLIANVAMYFVISVQF 765


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 436 HRCHGSIVLC 407
           HRCHG++  C
Sbjct: 347 HRCHGNLQSC 356


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 445 PGGPKPEQRFHSFYNYCDLFN 507
           PG    E  F SFY  CD  +
Sbjct: 787 PGKYTAEAGFMSFYEICDFLH 807


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 200 LLIIKCLTWSRNSLFT 247
           L++ KC+T S +SL+T
Sbjct: 230 LILAKCITSSLSSLYT 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,365
Number of Sequences: 336
Number of extensions: 3440
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)