Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30a08
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28739-15|AAK68188.1|  537|Caenorhabditis elegans Hypothetical p...   149   2e-36
U28739-14|AAM54207.1|  535|Caenorhabditis elegans Hypothetical p...   149   2e-36
AF016674-3|AAB66128.1|  558|Caenorhabditis elegans Hypothetical ...    73   1e-13
Z75711-8|CAJ43907.1|  118|Caenorhabditis elegans Hypothetical pr...    33   0.13 
U97403-9|AAB52469.1|  389|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AL132847-2|CAB63372.1|  343|Caenorhabditis elegans Hypothetical ...    28   4.9  
U80028-8|AAN73866.1|  378|Caenorhabditis elegans Serpentine rece...    28   6.5  

>U28739-15|AAK68188.1|  537|Caenorhabditis elegans Hypothetical
           protein C17G10.9a protein.
          Length = 537

 Score =  149 bits (361), Expect = 2e-36
 Identities = 70/140 (50%), Positives = 95/140 (67%), Gaps = 2/140 (1%)
 Frame = +1

Query: 214 MPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKYFENTPWPDEDEVSPIVDNDN- 390
           +P+ V  +LVYF  M++E    EIL LY+  FP LTE++F +  WPDE+ V  I+   N 
Sbjct: 32  VPNEVADYLVYFSRMVDEQNVPEILTLYDQAFPDLTERFFRDRMWPDENVVERIIGPGNK 91

Query: 391 VFMILYKELYYRDIYARVPGGPKPEQRFHSFYNYCDLFNYIL-SVTPVPLELPDQWLWEL 567
           +F+ILYKELYYR +YAR   GP    R+ SF NY +LF+ +L S  P+PL LP+ WLW++
Sbjct: 92  LFIILYKELYYRQLYARNTRGPLLVHRYESFMNYQELFSELLSSKDPIPLSLPNVWLWDI 151

Query: 568 IDEFVYQFQSFAQYRSRTTK 627
           IDEFVYQFQ+F  Y++   K
Sbjct: 152 IDEFVYQFQAFCLYKANPGK 171


>U28739-14|AAM54207.1|  535|Caenorhabditis elegans Hypothetical
           protein C17G10.9b protein.
          Length = 535

 Score =  149 bits (361), Expect = 2e-36
 Identities = 70/140 (50%), Positives = 95/140 (67%), Gaps = 2/140 (1%)
 Frame = +1

Query: 214 MPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKYFENTPWPDEDEVSPIVDNDN- 390
           +P+ V  +LVYF  M++E    EIL LY+  FP LTE++F +  WPDE+ V  I+   N 
Sbjct: 30  VPNEVADYLVYFSRMVDEQNVPEILTLYDQAFPDLTERFFRDRMWPDENVVERIIGPGNK 89

Query: 391 VFMILYKELYYRDIYARVPGGPKPEQRFHSFYNYCDLFNYIL-SVTPVPLELPDQWLWEL 567
           +F+ILYKELYYR +YAR   GP    R+ SF NY +LF+ +L S  P+PL LP+ WLW++
Sbjct: 90  LFIILYKELYYRQLYARNTRGPLLVHRYESFMNYQELFSELLSSKDPIPLSLPNVWLWDI 149

Query: 568 IDEFVYQFQSFAQYRSRTTK 627
           IDEFVYQFQ+F  Y++   K
Sbjct: 150 IDEFVYQFQAFCLYKANPGK 169


>AF016674-3|AAB66128.1|  558|Caenorhabditis elegans Hypothetical
           protein C03H5.5 protein.
          Length = 558

 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
 Frame = +1

Query: 211 KMPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKYFENTPWPDEDEVSPIVDNDN 390
           K  D+V ++L +F  MI E    EI N Y +   T+ ++   +  WPDE  V   +  +N
Sbjct: 93  KATDIVLEYLAHFSKMIAENNLLEIQNCYYDRLETVQKQLPPSFTWPDEITVRKSISPEN 152

Query: 391 V-FMILYKELYYRDIYARVPGGPKPEQRFHSFYNYCDLFNYILSVTPVPLELPDQWLWEL 567
             FM+LYKEL YR + A      +  Q      NY  +F    S+ P  L LPD W+ ++
Sbjct: 153 QDFMVLYKELKYRRLNA------EARQNKDMLENYQSIF----SILPGKLNLPDYWILDI 202

Query: 568 IDEFVYQFQS 597
           ++E+V+Q Q+
Sbjct: 203 MEEYVFQIQT 212


>Z75711-8|CAJ43907.1|  118|Caenorhabditis elegans Hypothetical
           protein K02B12.9 protein.
          Length = 118

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 136 YESYGDYEAQSTEHYEPEYDRSSY 207
           YESYG Y+     HY+P Y   SY
Sbjct: 43  YESYGKYDDHKDSHYQPSYYHDSY 66


>U97403-9|AAB52469.1|  389|Caenorhabditis elegans Hypothetical
           protein T10E9.1 protein.
          Length = 389

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 88  ILLTTMYSSDDYNEGGYESYGDYEAQSTEHYEPEYDRSSY 207
           ILL   + +DD +E   ++Y DY+     +++P+YD   Y
Sbjct: 330 ILLGLPHFADDSSEYD-DNYDDYDNDEDSNFDPDYDYERY 368


>AL132847-2|CAB63372.1|  343|Caenorhabditis elegans Hypothetical
           protein Y48G10A.3 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 175 HYEPEYDRSSYYKMPDMVKKFLVYFRNMINEGVTYEILNLYENTFP 312
           H+   YDR S    PD+V+++ V+F+++ N     E +  Y    P
Sbjct: 195 HFGRNYDRCS----PDIVRQYRVFFQHLPNPNSLAEFIESYIQRTP 236


>U80028-8|AAN73866.1|  378|Caenorhabditis elegans Serpentine
           receptor, class w protein118 protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 154 SRHRIRNLPHYNRRWNTWLLIESNSIHTL 68
           +RH +  L  Y+RR +TWL++    I TL
Sbjct: 113 NRHLLHLLKDYSRRCSTWLMVFIALIRTL 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,297,071
Number of Sequences: 27780
Number of extensions: 304585
Number of successful extensions: 866
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)