Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30a04
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   3.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   3.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = +2

Query: 512  D*ISVCDKCYN--NEDVRCANESG 577
            D ++VCD CY+   E     NESG
Sbjct: 1371 DTVAVCDACYSTIEEKNLQVNESG 1394



 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 445 FLRIFITGFNVERIIRRSSLFL 380
           +LR+F T FNV      S L L
Sbjct: 525 YLRVFFTVFNVVHCYLASELVL 546


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 232 SNVHRQQHSRSPARVL 279
           +N+H+   SR+PA++L
Sbjct: 241 NNLHKALESRNPAKIL 256


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 232 SNVHRQQHSRSPARVL 279
           +N+H+   SR+PA++L
Sbjct: 241 NNLHKALESRNPAKIL 256


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 244 YERYFRGIKGVFVCEFELQHELFAF 170
           +  YF  I G F C+  +Q   +AF
Sbjct: 386 FASYFAYIFGKFACKIMIQGFSYAF 410


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 244 YERYFRGIKGVFVCEFELQHELFAF 170
           +  YF  I G F C+  +Q   +AF
Sbjct: 386 FASYFAYIFGKFACKIMIQGFSYAF 410


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 244 YERYFRGIKGVFVCEFELQHELFAF 170
           +  YF  I G F C+  +Q   +AF
Sbjct: 386 FASYFAYIFGKFACKIMIQGFSYAF 410


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 244 YERYFRGIKGVFVCEFELQHELFAF 170
           +  YF  I G F C+  +Q   +AF
Sbjct: 386 FASYFAYIFGKFACKIMIQGFSYAF 410


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 256 SRSPARVLERAHLPFD 303
           SR P+ V++ +H+P D
Sbjct: 416 SRKPSFVIQFSHIPVD 431


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,757
Number of Sequences: 336
Number of extensions: 3250
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)