Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30a01
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    25   2.7  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   6.2  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   6.2  

>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 521 TTQIGMPILR*PPNRWQWHT 580
           +TQ+   I R PP RW W T
Sbjct: 514 STQVCRMIKRLPPFRWLWST 533


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 564 DGSGIRVCDISCHDHGPDLQVS 629
           +G+ + +  +SC++H P L  S
Sbjct: 154 NGTALEIPGLSCYEHAPTLSKS 175


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 564 DGSGIRVCDISCHDHGPDLQVS 629
           +G+ + +  +SC++H P L  S
Sbjct: 155 NGTALEIPGLSCYEHAPTLSKS 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,763
Number of Sequences: 2352
Number of extensions: 15868
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)