Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30a01
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29082-7|AAA68404.3| 319|Caenorhabditis elegans Hypothetical pr... 162 2e-40
Z48009-1|CAA88076.1| 329|Caenorhabditis elegans Hypothetical pr... 145 3e-35
Z81534-3|CAB04347.3| 328|Caenorhabditis elegans Hypothetical pr... 140 6e-34
Z66565-1|CAA91477.1| 324|Caenorhabditis elegans Hypothetical pr... 139 2e-33
Z69902-2|CAA93764.1| 326|Caenorhabditis elegans Hypothetical pr... 135 2e-32
AL021175-8|CAA15970.2| 201|Caenorhabditis elegans Hypothetical ... 128 3e-30
AL021175-7|CAE54921.1| 329|Caenorhabditis elegans Hypothetical ... 128 3e-30
Z48045-8|CAI46557.1| 331|Caenorhabditis elegans Hypothetical pr... 78 6e-15
U40947-5|AAC48070.1| 505|Caenorhabditis elegans Inward rectifyi... 29 3.7
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 28 6.5
>U29082-7|AAA68404.3| 319|Caenorhabditis elegans Hypothetical
protein C14F5.4 protein.
Length = 319
Score = 162 bits (394), Expect = 2e-40
Identities = 77/157 (49%), Positives = 105/157 (66%)
Frame = +1
Query: 154 DITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQVI 333
D QP +DQSTF GR RHFA +++PL++ +S + P T LE++
Sbjct: 4 DPDQPRYDQSTFYGRLRHFAGMTDPLIAFSSTTELITASELMQKCREKKPVPAT-LEELH 62
Query: 334 KAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSFNA 513
++++L +SAFHPD+GELQN GRM F + GG ++ GAM+ WY++ AV+FWQW NQSFNA
Sbjct: 63 RSQRLCQSAFHPDTGELQNFAGRMCFNVWGGTMLCGAMMIWYKSTPAVIFWQWANQSFNA 122
Query: 514 LVNYTNRNANSPLTTKQMAVAYVSATSAAMTTALIFK 624
LVNYTNRNA S LTTK + V+Y +A S A+ A+ K
Sbjct: 123 LVNYTNRNAKSTLTTKDLVVSYSTAVSGALAMAIGLK 159
>Z48009-1|CAA88076.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.2 protein.
Length = 329
Score = 145 bits (351), Expect = 3e-35
Identities = 71/154 (46%), Positives = 92/154 (59%)
Frame = +1
Query: 154 DITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQVI 333
DI++P WDQ T+ GR +HF +NPL +S G P ++++
Sbjct: 13 DISKPKWDQGTYAGRAKHFFSSTNPLTLFSSRIQQEKCKEIVTNYKTGVISPTLTVDELW 72
Query: 334 KAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSFNA 513
KAK LY+S +HPD+GE GRMS QMPG + TG +L YRT VVF W NQSFNA
Sbjct: 73 KAKTLYDSTYHPDTGEKMFFLGRMSAQMPGNMVTTGMLLGLYRTLPGVVFSHWFNQSFNA 132
Query: 514 LVNYTNRNANSPLTTKQMAVAYVSATSAAMTTAL 615
+VNYTNR+ NS T +++ V+Y ATS AMT AL
Sbjct: 133 VVNYTNRSGNSKATNERLFVSYCCATSGAMTVAL 166
>Z81534-3|CAB04347.3| 328|Caenorhabditis elegans Hypothetical
protein F37H8.4 protein.
Length = 328
Score = 140 bits (340), Expect = 6e-34
Identities = 68/156 (43%), Positives = 91/156 (58%)
Frame = +1
Query: 148 RIDITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQ 327
R DI++P W Q T+ GR RHF ++NPL +S G+ P + +
Sbjct: 11 RPDISKPQWSQRTYYGRVRHFFTLTNPLTLTSSVARQEQCRQIVLDYKNGKVSPTLTVSE 70
Query: 328 VIKAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSF 507
+ KAK LY+S +HPD+GE GRMS QMP LI G +L YRT VVF W+NQSF
Sbjct: 71 LWKAKTLYDSTYHPDTGEKMFFLGRMSAQMPANMLINGMLLSLYRTFPGVVFSHWINQSF 130
Query: 508 NALVNYTNRNANSPLTTKQMAVAYVSATSAAMTTAL 615
NA+VNYTNR+ NS + +++ ++Y AT AM AL
Sbjct: 131 NAVVNYTNRSGNSKTSNERLILSYSCATGGAMAAAL 166
>Z66565-1|CAA91477.1| 324|Caenorhabditis elegans Hypothetical
protein T04F8.1 protein.
Length = 324
Score = 139 bits (336), Expect = 2e-33
Identities = 70/156 (44%), Positives = 93/156 (59%)
Frame = +1
Query: 148 RIDITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQ 327
R DI++P WDQSTF GR +HF I+NPL G L Q
Sbjct: 11 RPDISKPKWDQSTFEGRAKHFFAITNPLNLFHGEKQLDEFKKIVEDYRKGSVSNDLTLNQ 70
Query: 328 VIKAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSF 507
+ KAK + +SAFHP +GE + GRMS Q+P ITG ML +Y++ AV+FWQW+NQSF
Sbjct: 71 LWKAKHVVDSAFHPSTGEKMMMVGRMSAQVPMNMAITGGMLTFYKSPMAVIFWQWLNQSF 130
Query: 508 NALVNYTNRNANSPLTTKQMAVAYVSATSAAMTTAL 615
NA+VNYTNR+ + + Q+ V+Y +AT A+T AL
Sbjct: 131 NAVVNYTNRSGDGG-SVSQLLVSYCAATGGALTAAL 165
>Z69902-2|CAA93764.1| 326|Caenorhabditis elegans Hypothetical
protein C47D12.3 protein.
Length = 326
Score = 135 bits (327), Expect = 2e-32
Identities = 65/158 (41%), Positives = 93/158 (58%)
Frame = +1
Query: 154 DITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQVI 333
DI++P WDQ+TF GR +F +N L S G+ P ++++
Sbjct: 13 DISRPRWDQNTFQGRVNYFFSTANCLNLFVSNAKLEKARNIVLEYKQGKYDPNMTVDELW 72
Query: 334 KAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSFNA 513
KAK LY+SAFHPD+GE + GRMS Q+P LITG ML +Y+ V+F+ WVNQSFNA
Sbjct: 73 KAKTLYDSAFHPDTGEKMFILGRMSAQVPCNMLITGGMLTFYQKLPHVIFFHWVNQSFNA 132
Query: 514 LVNYTNRNANSPLTTKQMAVAYVSATSAAMTTALIFKF 627
+VNYTNR+ + + ++Y AT+ A++ AL F +
Sbjct: 133 IVNYTNRSGTHKQDDRTLILSYCGATTGALSCALSFNY 170
>AL021175-8|CAA15970.2| 201|Caenorhabditis elegans Hypothetical
protein Y6E2A.9b protein.
Length = 201
Score = 128 bits (309), Expect = 3e-30
Identities = 61/154 (39%), Positives = 85/154 (55%)
Frame = +1
Query: 154 DITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQVI 333
DI++ WD T+ GR +H+ +NP+ S G P ++++
Sbjct: 13 DISKSKWDLDTYSGRVKHYFASANPMTLFTSSNTQEMCRKIVVDYKKGIINPELTMDELW 72
Query: 334 KAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSFNA 513
AK LY+S +HPD+GE GRMS Q P +ITG +L YRT ++F W+NQSFNA
Sbjct: 73 SAKILYDSVYHPDTGEKMFCLGRMSAQTPANMVITGMLLSCYRTCPGIIFSHWINQSFNA 132
Query: 514 LVNYTNRNANSPLTTKQMAVAYVSATSAAMTTAL 615
+VNYTNR+ N T +Q+ +Y AT AA T AL
Sbjct: 133 IVNYTNRSGNCRTTNQQLLYSYFCATGAATTAAL 166
>AL021175-7|CAE54921.1| 329|Caenorhabditis elegans Hypothetical
protein Y6E2A.9a protein.
Length = 329
Score = 128 bits (309), Expect = 3e-30
Identities = 61/154 (39%), Positives = 85/154 (55%)
Frame = +1
Query: 154 DITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQVI 333
DI++ WD T+ GR +H+ +NP+ S G P ++++
Sbjct: 13 DISKSKWDLDTYSGRVKHYFASANPMTLFTSSNTQEMCRKIVVDYKKGIINPELTMDELW 72
Query: 334 KAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSFNA 513
AK LY+S +HPD+GE GRMS Q P +ITG +L YRT ++F W+NQSFNA
Sbjct: 73 SAKILYDSVYHPDTGEKMFCLGRMSAQTPANMVITGMLLSCYRTCPGIIFSHWINQSFNA 132
Query: 514 LVNYTNRNANSPLTTKQMAVAYVSATSAAMTTAL 615
+VNYTNR+ N T +Q+ +Y AT AA T AL
Sbjct: 133 IVNYTNRSGNCRTTNQQLLYSYFCATGAATTAAL 166
>Z48045-8|CAI46557.1| 331|Caenorhabditis elegans Hypothetical
protein C41C4.10 protein.
Length = 331
Score = 77.8 bits (183), Expect = 6e-15
Identities = 49/155 (31%), Positives = 73/155 (47%)
Frame = +1
Query: 136 PEEKRIDITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGT 315
P + + +P + Q TF+GR+ H + +P AS AG
Sbjct: 11 PIYPKFKLGEPRFPQDTFLGRYLHCLDVIDPRTLFASNKKLEESLELLNSFKAGTAT-NV 69
Query: 316 KLEQVIKAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWV 495
+ + +A++L + HPD+GE RMS +P G + ML + ++FWQW+
Sbjct: 70 PDKSLWEAQKLKSAILHPDTGEKVLPPFRMSGFVPFGWITVTGMLLPNPSWPTLLFWQWM 129
Query: 496 NQSFNALVNYTNRNANSPLTTKQMAVAYVSATSAA 600
NQS NA VNY NRNA P + AY +A +AA
Sbjct: 130 NQSHNACVNYANRNATQPQPLSKYIGAYGAAVTAA 164
>U40947-5|AAC48070.1| 505|Caenorhabditis elegans Inward rectifying
k (potassium)channel family protein 1 protein.
Length = 505
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 239 IDSSGLEMKAKCRNLPTNVLWSH 171
++S+G+ +AK LP+ VLW H
Sbjct: 334 VESTGMTAQAKTSYLPSEVLWGH 356
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 201 EPSHKCALVPQWLGDVYSLFFRHFIFLSYGTKMD 100
+PS C +P+WLG++ S R + + G K+D
Sbjct: 92 QPSFDC--LPEWLGEIESYANRRVLKILVGNKVD 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,521,047
Number of Sequences: 27780
Number of extensions: 333501
Number of successful extensions: 732
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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