Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2p22
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    29   0.030
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    26   0.37 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    25   0.48 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   5.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 29.5 bits (63), Expect = 0.030
 Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 7/81 (8%)
 Frame = -1

Query: 420 IPILDTSDTNYSDDLENSY-------YLSSQKNVRVFECERTPSSGIVYRFDIFGAMICD 262
           +P+    +    +D+ NS+       Y  S     + EC+  P        D+ G+  C 
Sbjct: 150 VPLKKLCNNGTCEDIGNSHRCHCSDGYSGSYCQTEINECDSAPCQNGGTCLDLIGSYSCK 209

Query: 261 CSKHFRKHKCIYRSTACSFPN 199
           C K F+   C      C  PN
Sbjct: 210 CPKGFQGQNCELNVDDCK-PN 229



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/32 (31%), Positives = 11/32 (34%)
 Frame = +3

Query: 150 CEICTYNSSKQTSTPHSSGRNKPCFGKYICVC 245
           CEI T N        H     +   G Y C C
Sbjct: 412 CEIDTINECDSNPCKHLDAICQDKLGDYACYC 443


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 553 ENLLKILFFNRVMFH 509
           EN   IL+F+R+MFH
Sbjct: 329 ENYYNILYFSRIMFH 343


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 160 VHTIHRNKRVHHIVREGTSRASVNTFVFAE 249
           ++++H+ K   H+VR GT    V +F F E
Sbjct: 146 LNSLHKYKPTVHLVRVGTEPRRVISFPFPE 175


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 108 NRRAVNNLIVVNQVCEICTYNSSKQTS 188
           N   +NN + VNQ+   C  N S  T+
Sbjct: 753 NPHDINNPLSVNQLTGQCVRNDSSDTN 779


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 108 NRRAVNNLIVVNQVCEICTYNSSKQTS 188
           N   +NN + VNQ+   C  N S  T+
Sbjct: 645 NPHDINNPLSVNQLTGQCVRNDSSDTN 671


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 312 KVYARTQRPLRSSDWTNN--KNSRDHLSNLCQMCQEL 416
           +V  RTQ    S + + +  KN R+  + LC++C+ +
Sbjct: 247 QVTDRTQSMSESKNKSESAWKNLREDYNRLCRLCKRV 283


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 312 KVYARTQRPLRSSDWTNN--KNSRDHLSNLCQMCQEL 416
           +V  RTQ    S + + +  KN R+  + LC++C+ +
Sbjct: 247 QVTDRTQSMSESKNKSESAWKNLREDYNRLCRLCKRV 283


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 312 KVYARTQRPLRSSDWTNN--KNSRDHLSNLCQMCQEL 416
           +V  RTQ    S + + +  KN R+  + LC++C+ +
Sbjct: 247 QVTDRTQSMSESKNKSESAWKNLREDYNRLCRLCKRV 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,954
Number of Sequences: 336
Number of extensions: 3629
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)