Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2p22
(738 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053564-1|AAH53564.1| 241|Homo sapiens chromosome 10 open read... 66 1e-10
BC039249-1|AAH39249.1| 301|Homo sapiens C10orf56 protein protein. 66 1e-10
BC028617-1|AAH28617.1| 241|Homo sapiens chromosome 10 open read... 66 1e-10
AL133481-2|CAH72724.1| 241|Homo sapiens chromosome 10 open read... 66 1e-10
AK075279-1|BAC11516.1| 241|Homo sapiens protein ( Homo sapiens ... 66 1e-10
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 32 1.9
BC017592-1|AAH17592.2| 429|Homo sapiens zinc and ring finger 4 ... 31 4.3
AC005764-1|AAC62428.1| 420|Homo sapiens R31343_1 protein. 31 4.3
AF471542-1|AAQ05717.1| 123|Homo sapiens Ig heavy chain variable... 30 7.5
Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( S domain contai... 30 10.0
DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat ... 30 10.0
DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein. 30 10.0
DQ228004-1|ABB59560.1| 1144|Homo sapiens TRIOBP isoform 4 protein. 30 10.0
DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein. 30 10.0
AB051449-1|BAB33332.2| 1653|Homo sapiens KIAA1662 protein protein. 30 10.0
>BC053564-1|AAH53564.1| 241|Homo sapiens chromosome 10 open reading
frame 56 protein.
Length = 241
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 189 TPHSSGRNKPCFGKYICV-CGNAWSSRKSWPQKYQICTRCRKKVYARTQRPLRSSDWTN- 362
TP+ K CFG+Y C C W S SW Q C +C VY QRPL D +
Sbjct: 158 TPYQG--KKRCFGEYKCPKCKRKWMSGNSWANMGQECIKCHINVYPHKQRPLEKPDGLDV 215
Query: 363 NKNSRDHLSNLCQMCQELGYDCGKL 437
+ S++H +LC+ C+ LGY C ++
Sbjct: 216 SDQSKEHPQHLCEKCKVLGYYCRRV 240
>BC039249-1|AAH39249.1| 301|Homo sapiens C10orf56 protein protein.
Length = 301
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 189 TPHSSGRNKPCFGKYICV-CGNAWSSRKSWPQKYQICTRCRKKVYARTQRPLRSSDWTN- 362
TP+ K CFG+Y C C W S SW Q C +C VY QRPL D +
Sbjct: 218 TPYQG--KKRCFGEYKCPKCKRKWMSGNSWANMGQECIKCHINVYPHKQRPLEKPDGLDV 275
Query: 363 NKNSRDHLSNLCQMCQELGYDCGKL 437
+ S++H +LC+ C+ LGY C ++
Sbjct: 276 SDQSKEHPQHLCEKCKVLGYYCRRV 300
>BC028617-1|AAH28617.1| 241|Homo sapiens chromosome 10 open reading
frame 56 protein.
Length = 241
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 189 TPHSSGRNKPCFGKYICV-CGNAWSSRKSWPQKYQICTRCRKKVYARTQRPLRSSDWTN- 362
TP+ K CFG+Y C C W S SW Q C +C VY QRPL D +
Sbjct: 158 TPYQG--KKRCFGEYKCPKCKRKWMSGNSWANMGQECIKCHINVYPHKQRPLEKPDGLDV 215
Query: 363 NKNSRDHLSNLCQMCQELGYDCGKL 437
+ S++H +LC+ C+ LGY C ++
Sbjct: 216 SDQSKEHPQHLCEKCKVLGYYCRRV 240
>AL133481-2|CAH72724.1| 241|Homo sapiens chromosome 10 open reading
frame 56 protein.
Length = 241
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 189 TPHSSGRNKPCFGKYICV-CGNAWSSRKSWPQKYQICTRCRKKVYARTQRPLRSSDWTN- 362
TP+ K CFG+Y C C W S SW Q C +C VY QRPL D +
Sbjct: 158 TPYQG--KKRCFGEYKCPKCKRKWMSGNSWANMGQECIKCHINVYPHKQRPLEKPDGLDV 215
Query: 363 NKNSRDHLSNLCQMCQELGYDCGKL 437
+ S++H +LC+ C+ LGY C ++
Sbjct: 216 SDQSKEHPQHLCEKCKVLGYYCRRV 240
>AK075279-1|BAC11516.1| 241|Homo sapiens protein ( Homo sapiens
cDNA FLJ90798 fis, clone THYRO1001803. ).
Length = 241
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 189 TPHSSGRNKPCFGKYICV-CGNAWSSRKSWPQKYQICTRCRKKVYARTQRPLRSSDWTN- 362
TP+ K CFG+Y C C W S SW Q C +C VY QRPL D +
Sbjct: 158 TPYQG--KKRCFGEYKCPKCKRKWMSGNSWANMGQECIKCHINVYPHKQRPLEKPDGLDV 215
Query: 363 NKNSRDHLSNLCQMCQELGYDCGKL 437
+ S++H +LC+ C+ LGY C ++
Sbjct: 216 SDQSKEHPQHLCEKCKVLGYYCRRV 240
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 32.3 bits (70), Expect = 1.9
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = +3
Query: 75 ECDSRERCQHCNRRAVNNLIVVNQVCEICTYN---SSKQTSTPHSSGRNKPCFGKYICVC 245
+C + CQ C + ++ ++V + C+ + P S + K C C
Sbjct: 269 QCPECKVCQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKACRVCRACGA 328
Query: 246 GNAWSSRKS-WPQKYQICTRCRKKVYARTQR 335
G+A + S W + Y +C RC K +T R
Sbjct: 329 GSAELNPNSEWFENYSLCHRCHKAQGGQTIR 359
>BC017592-1|AAH17592.2| 429|Homo sapiens zinc and ring finger 4
protein.
Length = 429
Score = 31.1 bits (67), Expect = 4.3
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 5/105 (4%)
Frame = +3
Query: 24 IVKIAFI*LNMGCFWSSECDSRER---CQHCNRRAVNNLIVVNQVCEICT--YNSSKQTS 188
+V AF LN W+ C S R C + V N +C IC Y Q
Sbjct: 264 LVVSAFFVLNHLWLWAQACCSHRRPVKTSTCQKAQVRTFTWHNDLCAICLDEYEEGDQLK 323
Query: 189 TPHSSGRNKPCFGKYICVCGNAWSSRKSWPQKYQICTRCRKKVYA 323
PC Y C C + W S+ P++ C C++ V A
Sbjct: 324 I-------LPCSHTYHCKCIDPWFSQA--PRR--SCPVCKQSVAA 357
>AC005764-1|AAC62428.1| 420|Homo sapiens R31343_1 protein.
Length = 420
Score = 31.1 bits (67), Expect = 4.3
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 5/105 (4%)
Frame = +3
Query: 24 IVKIAFI*LNMGCFWSSECDSRER---CQHCNRRAVNNLIVVNQVCEICT--YNSSKQTS 188
+V AF LN W+ C S R C + V N +C IC Y Q
Sbjct: 255 LVVSAFFVLNHLWLWAQACCSHRRPVKTSTCQKAQVRTFTWHNDLCAICLDEYEEGDQLK 314
Query: 189 TPHSSGRNKPCFGKYICVCGNAWSSRKSWPQKYQICTRCRKKVYA 323
PC Y C C + W S+ P++ C C++ V A
Sbjct: 315 I-------LPCSHTYHCKCIDPWFSQA--PRR--SCPVCKQSVAA 348
>AF471542-1|AAQ05717.1| 123|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 123
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = -1
Query: 384 DDLENSYYLSSQ----KNVRVFECERTPSSGIVYRFDIFG 277
DD +NS YL ++ V+ C R S ++Y FDI+G
Sbjct: 75 DDSKNSQYLQMNSLKTEDTAVYYCTRGYSGALIYAFDIWG 114
>Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( S domain
containing protein ).).
Length = 2193
Score = 29.9 bits (64), Expect = 10.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 303 CRKKVYARTQRPLRSSDWTNNKNSRDHLSN 392
C +K R P RS+ W N +NS H +N
Sbjct: 700 CTQKENLRPSSPHRSTQWNNPRNSSPHRTN 729
>DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat on
actin protein.
Length = 2266
Score = 29.9 bits (64), Expect = 10.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 303 CRKKVYARTQRPLRSSDWTNNKNSRDHLSN 392
C +K R P RS+ W N +NS H +N
Sbjct: 872 CTQKENLRPSSPHRSTQWNNPRNSSPHRTN 901
>DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein.
Length = 2365
Score = 29.9 bits (64), Expect = 10.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 303 CRKKVYARTQRPLRSSDWTNNKNSRDHLSN 392
C +K R P RS+ W N +NS H +N
Sbjct: 872 CTQKENLRPSSPHRSTQWNNPRNSSPHRTN 901
>DQ228004-1|ABB59560.1| 1144|Homo sapiens TRIOBP isoform 4 protein.
Length = 1144
Score = 29.9 bits (64), Expect = 10.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 303 CRKKVYARTQRPLRSSDWTNNKNSRDHLSN 392
C +K R P RS+ W N +NS H +N
Sbjct: 700 CTQKENLRPSSPHRSTQWNNPRNSSPHRTN 729
>DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein.
Length = 2193
Score = 29.9 bits (64), Expect = 10.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 303 CRKKVYARTQRPLRSSDWTNNKNSRDHLSN 392
C +K R P RS+ W N +NS H +N
Sbjct: 700 CTQKENLRPSSPHRSTQWNNPRNSSPHRTN 729
>AB051449-1|BAB33332.2| 1653|Homo sapiens KIAA1662 protein protein.
Length = 1653
Score = 29.9 bits (64), Expect = 10.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 303 CRKKVYARTQRPLRSSDWTNNKNSRDHLSN 392
C +K R P RS+ W N +NS H +N
Sbjct: 160 CTQKENLRPSSPHRSTQWNNPRNSSPHRTN 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,970,719
Number of Sequences: 237096
Number of extensions: 1981374
Number of successful extensions: 4286
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4277
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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