Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2p13
(325 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37 pro... 112 3e-25
L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37 pro... 112 3e-25
D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37 pro... 112 3e-25
CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein. 112 3e-25
BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein. 112 3e-25
BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37 p... 112 3e-25
AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37 p... 112 3e-25
>S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 112 bits (269), Expect = 3e-25
Identities = 52/92 (56%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 KGTSGFGKRRNKTHTLCRRCGRSSYHIXQSKCAXXGYPAAKXRSYHWSVKAXXXXXXXXX 180
KGTS FGKRRNKTHTLCRRCG +YH+ +S C GYPA + R Y+WS KA
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTG 62
Query: 181 XXXHLXIVRRRFRNGFKEG-KPTPPXKAVASS 273
HL IV RRFR+GF+EG P P AVA+S
Sbjct: 63 RMSHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 112 bits (269), Expect = 3e-25
Identities = 52/92 (56%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 KGTSGFGKRRNKTHTLCRRCGRSSYHIXQSKCAXXGYPAAKXRSYHWSVKAXXXXXXXXX 180
KGTS FGKRRNKTHTLCRRCG +YH+ +S C GYPA + R Y+WS KA
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTG 62
Query: 181 XXXHLXIVRRRFRNGFKEG-KPTPPXKAVASS 273
HL IV RRFR+GF+EG P P AVA+S
Sbjct: 63 RMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 112 bits (269), Expect = 3e-25
Identities = 52/92 (56%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 KGTSGFGKRRNKTHTLCRRCGRSSYHIXQSKCAXXGYPAAKXRSYHWSVKAXXXXXXXXX 180
KGTS FGKRRNKTHTLCRRCG +YH+ +S C GYPA + R Y+WS KA
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTG 62
Query: 181 XXXHLXIVRRRFRNGFKEG-KPTPPXKAVASS 273
HL IV RRFR+GF+EG P P AVA+S
Sbjct: 63 RMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein.
Length = 97
Score = 112 bits (269), Expect = 3e-25
Identities = 52/92 (56%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 KGTSGFGKRRNKTHTLCRRCGRSSYHIXQSKCAXXGYPAAKXRSYHWSVKAXXXXXXXXX 180
KGTS FGKRRNKTHTLCRRCG +YH+ +S C GYPA + R Y+WS KA
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTG 62
Query: 181 XXXHLXIVRRRFRNGFKEG-KPTPPXKAVASS 273
HL IV RRFR+GF+EG P P AVA+S
Sbjct: 63 RMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein.
Length = 97
Score = 112 bits (269), Expect = 3e-25
Identities = 52/92 (56%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 KGTSGFGKRRNKTHTLCRRCGRSSYHIXQSKCAXXGYPAAKXRSYHWSVKAXXXXXXXXX 180
KGTS FGKRRNKTHTLCRRCG +YH+ +S C GYPA + R Y+WS KA
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTG 62
Query: 181 XXXHLXIVRRRFRNGFKEG-KPTPPXKAVASS 273
HL IV RRFR+GF+EG P P AVA+S
Sbjct: 63 RMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 112 bits (269), Expect = 3e-25
Identities = 52/92 (56%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 KGTSGFGKRRNKTHTLCRRCGRSSYHIXQSKCAXXGYPAAKXRSYHWSVKAXXXXXXXXX 180
KGTS FGKRRNKTHTLCRRCG +YH+ +S C GYPA + R Y+WS KA
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTG 62
Query: 181 XXXHLXIVRRRFRNGFKEG-KPTPPXKAVASS 273
HL IV RRFR+GF+EG P P AVA+S
Sbjct: 63 RMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 112 bits (269), Expect = 3e-25
Identities = 52/92 (56%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 KGTSGFGKRRNKTHTLCRRCGRSSYHIXQSKCAXXGYPAAKXRSYHWSVKAXXXXXXXXX 180
KGTS FGKRRNKTHTLCRRCG +YH+ +S C GYPA + R Y+WS KA
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTG 62
Query: 181 XXXHLXIVRRRFRNGFKEG-KPTPPXKAVASS 273
HL IV RRFR+GF+EG P P AVA+S
Sbjct: 63 RMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,172,266
Number of Sequences: 237096
Number of extensions: 449680
Number of successful extensions: 610
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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