Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2p13
         (325 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...    97   3e-21
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...    91   2e-19
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    26   5.4  
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    26   5.4  
Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical pr...    26   7.2  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score = 97.1 bits (231), Expect = 3e-21
 Identities = 43/87 (49%), Positives = 55/87 (63%)
 Frame = +1

Query: 1   KGTSGFGKRRNKTHTLCRRCGRSSYHIXQSKCAXXGYPAAKXRSYHWSVKAXXXXXXXXX 180
           KGT  FGK+  K+HTLC+RCG+SS+HI + +CA  GYP AK R+Y+W  K+         
Sbjct: 3   KGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTG 62

Query: 181 XXXHLXIVRRRFRNGFKEGKPTPPXKA 261
              HL  V  RFRNGF+EG  TP  +A
Sbjct: 63  RTRHLRDVNARFRNGFREG-TTPKPRA 88


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score = 91.1 bits (216), Expect = 2e-19
 Identities = 39/83 (46%), Positives = 50/83 (60%)
 Frame = +1

Query: 1   KGTSGFGKRRNKTHTLCRRCGRSSYHIXQSKCAXXGYPAAKXRSYHWSVKAXXXXXXXXX 180
           KGT  FGK+  K+HTLC+RCG+SS+HI + +CA  GY  AK R+Y+W  K+         
Sbjct: 3   KGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTG 62

Query: 181 XXXHLXIVRRRFRNGFKEGKPTP 249
              HL  V  RFRNGF+   P P
Sbjct: 63  RTRHLRDVNARFRNGFRGTTPKP 85


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 16  FGKRRNKTHTLCRRCGRSSYHIXQSKCAXXGYPAA 120
           + K    TH  C +CG+ + +    KC   G P A
Sbjct: 166 YNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 16  FGKRRNKTHTLCRRCGRSSYHIXQSKCAXXGYPAA 120
           + K    TH  C +CG+ + +    KC   G P A
Sbjct: 94  YNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126


>Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical
           protein C17H1.9 protein.
          Length = 353

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +2

Query: 26  AEIRPIRYAEDVVDRH---ITFXNQNAPXXDILXQNXDP 133
           A+++ I+Y  D +++H   + F NQ       L  N DP
Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,275,045
Number of Sequences: 27780
Number of extensions: 68815
Number of successful extensions: 124
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)