Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2p12
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.7  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   6.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   6.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   6.2  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   6.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.2  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 14/62 (22%), Positives = 27/62 (43%)
 Frame = +3

Query: 432 ASPIDTLKEFYQKYNPPIRAHKHTCVGLGMEVIKRLKLLEKDFPGITKAMMLVSCDENIE 611
           +S ID  K  +     P++        L ++ ++ LK   +  PGI  ++ ++  D N  
Sbjct: 91  SSIIDKTKISFNFSQGPVKIMLQNATDLFIKSLESLKPGNQSTPGIKLSINIILSDPNTN 150

Query: 612 DL 617
            L
Sbjct: 151 KL 152


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 383 FGNNETTQQYLGFGY 339
           FGN+   QQ L +GY
Sbjct: 50  FGNHHIQQQQLQYGY 64


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 383 FGNNETTQQYLGFGY 339
           FGN+   QQ L +GY
Sbjct: 50  FGNHHIQQQQLQYGY 64


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 383 FGNNETTQQYLGFGY 339
           FGN+   QQ L +GY
Sbjct: 50  FGNHHIQQQQLQYGY 64


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 383 FGNNETTQQYLGFGY 339
           FGN+   QQ L +GY
Sbjct: 50  FGNHHIQQQQLQYGY 64


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -3

Query: 761 GARDVISKIRQEHAGSAVDFNVDRH*HVVLLSLDQKPLRS 642
           G R +I      HAG+   +  D     + + +DQ+P RS
Sbjct: 297 GVRIIIEIDAPSHAGNGWQWGPDAGLGNLSVCIDQQPWRS 336


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,949
Number of Sequences: 336
Number of extensions: 3153
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)