Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2p12
         (766 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    24   1.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   7.2  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   9.5  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 585 LVSCDENIEDLDDY 626
           L  CDE +ED DDY
Sbjct: 517 LKQCDEFVEDSDDY 530


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = -1

Query: 259 AGQ-LPALSWCLEPSQLNHSAPQR 191
           AG+ LP + W      LNH  P +
Sbjct: 426 AGEPLPRVQWLKNDEALNHDQPDK 449


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 467 LVEFFQGVDRGSHVSVVVRQEVA 399
           L++ F G D G + + VV +E+A
Sbjct: 66  LIKKFNGYDDGGNFNEVVIREIA 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,477
Number of Sequences: 438
Number of extensions: 3622
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)