Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2p11
         (101 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   0.28 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   0.28 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    19   5.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    18   7.8  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory
          receptor candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 0.28
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 80 KFVYWPKDTNALVPLV 33
          KF +WP   NAL+ L+
Sbjct: 48 KFAWWPLTRNALLVLI 63


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory
          receptor candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 0.28
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 80 KFVYWPKDTNALVPLV 33
          KF +WP   NAL+ L+
Sbjct: 48 KFAWWPLTRNALLVLI 63


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 18.6 bits (36), Expect = 5.9
 Identities = 4/6 (66%), Positives = 5/6 (83%)
 Frame = -2

Query: 43  CRWCGE 26
           C WCG+
Sbjct: 481 CMWCGQ 486


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 18.2 bits (35), Expect = 7.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 26  LSTPTAPTRWY 58
           L   TAP +WY
Sbjct: 217 LRRDTAPPQWY 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,987
Number of Sequences: 336
Number of extensions: 330
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 15
effective length of database: 117,545
effective search space used:  2115810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)