Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2p02
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   2.3  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.5  
AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 prote...    23   9.5  
AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 prote...    23   9.5  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   9.5  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 208 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLH 309
           +L+ E L  G   CN +  K CGK   HIR   H
Sbjct: 487 RLTFERLSGG---CNLHRCKLCGKVVTHIRNHYH 517


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/25 (36%), Positives = 10/25 (40%)
 Frame = -3

Query: 634 GGTAQYSRHWRGGPLHAASQTHHVH 560
           GG   +  H  GG   A    HH H
Sbjct: 703 GGGGHHLSHHHGGAAAATGHHHHQH 727


>AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -1

Query: 534 YVDLLTSGELELGT 493
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -1

Query: 534 YVDLLTSGELELGT 493
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +2

Query: 455 VTGGRHRSSRLCAVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASPMTAVLCSTA 634
           ++G R   +RL    S  SP    S  +R  + Q ++      CV+R+      +LCS+ 
Sbjct: 4   LSGKRPSGARLSI--SRGSPTGVYSVRRRWSLCQKLHFRDQVCCVQRSPPHWPYLLCSSC 61

Query: 635 RNM 643
             M
Sbjct: 62  SAM 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 853,152
Number of Sequences: 2352
Number of extensions: 19103
Number of successful extensions: 42
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)