Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2o24
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.77 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   2.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.2  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   9.5  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 415 DLNAIMFNCAEIKLNKGQMLFQTKIYRPD 501
           D N       EI LN   +LF  K++RP+
Sbjct: 210 DCNKNTSTSKEIALNNDVLLFFVKVFRPE 238


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 86  LLGAAWCKSFRQIWDKL 136
           LLGA WC+ +   +D +
Sbjct: 10  LLGAVWCEQYTTKYDNI 26


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 185 LVSATFL--IIAFTPIYLAIYPKFDETTYTK 99
           L++ T L  I+    +YL ++ +FD  T TK
Sbjct: 351 LINGTLLHTIVGAVTVYLIMFIQFDIATTTK 381


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 185 LVSATFL--IIAFTPIYLAIYPKFDETTYTK 99
           L++ T L  I+    +YL ++ +FD  T TK
Sbjct: 176 LINGTLLHTIVGAVTVYLIMFIQFDIATTTK 206


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +2

Query: 290 LAPILSRWLARRNLDCCTKAPILRCRAATIVFCAIWCKTANTILT 424
           L P+L R    RN+   T   +L      I    +W K    IL+
Sbjct: 728 LCPVLLRVSILRNIIVGTLMMVLGTGCVRIKITGVWLKFLRVILS 772


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 651  FFEIDSNSVGVFFLLIDSGGC 589
            F E+ SNS+ +       GGC
Sbjct: 1499 FIEVSSNSITLHLSAWSDGGC 1519


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 170 FLIIAFTPIYLAIYPKFDETTYTKRLQAMIEYI 72
           FL + F   +   Y  +  TTY+++L  + +YI
Sbjct: 79  FLCLPFYSYFF--YLSYIYTTYSRKLSGIFKYI 109


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 170 FLIIAFTPIYLAIYPKFDETTYTKRLQAMIEYI 72
           FL + F   +   Y  +  TTY+++L  + +YI
Sbjct: 35  FLCLPFYSYFF--YLSYIYTTYSRKLSGIFKYI 65


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 478 QTKIYRPDNNKTDAAVNTSS 537
           Q + YRP  N T    NTSS
Sbjct: 244 QMQSYRPTGNITPHGSNTSS 263


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 328 LRLLYKSAYSAV 363
           LR  YK+AYSA+
Sbjct: 66  LRQFYKTAYSAI 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,461
Number of Sequences: 336
Number of extensions: 2743
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)