Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2o19
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    27   0.61 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   1.1  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   4.3  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 339 SIWIEFLRF*C*NRSIERANRPKAGTILPA 250
           SIW E L+F C  + + R +RP    ++ A
Sbjct: 776 SIWAESLKFECRKQWLRRCHRPLVNRVISA 805


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 210 TNTKVDSVQTQLNGLEESFQPLDGLPAQLT 299
           TN+KV  +QT++NGL +    L    ++LT
Sbjct: 891 TNSKVKVLQTKINGLGKQIDKLSANISKLT 920


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 620 GFVCNKHNCGVYSICYTQTTH 558
           GFV +  NC  Y IC T  T+
Sbjct: 476 GFVPHPTNCARYYICLTADTY 496


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,567
Number of Sequences: 2352
Number of extensions: 12166
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)