Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2o15
         (772 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.              34   0.65 
BC126423-1|AAI26424.1|  210|Homo sapiens keratin associated prot...    31   4.6  
BC126421-1|AAI26422.1|  210|Homo sapiens keratin associated prot...    31   4.6  
AJ406945-1|CAC27584.1|  193|Homo sapiens keratin associated prot...    31   4.6  
AJ406939-1|CAC27578.1|  210|Homo sapiens keratin associated prot...    31   4.6  

>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
          Length = 1349

 Score = 33.9 bits (74), Expect = 0.65
 Identities = 40/134 (29%), Positives = 55/134 (41%), Gaps = 7/134 (5%)
 Frame = +2

Query: 71   TSLTMTTTAESPTRKRATKK*ANSIRSCTLS------TS*NSAASRTLRSMPIRARAIPR 232
            TS   TTT+ +PT    +    ++I + T S      TS  SA + +  S P    + P 
Sbjct: 689  TSTPQTTTSSAPTSSTTSAPTTSTISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAPT 748

Query: 233  AENTKGC*SMKPTTKC*LLTTSRCTWTIMTTVYKTDF*LFTQTINL*TALSLPAPCTN-T 409
               T       PTT     T++  T TI      T     T TI+  T  + P P T+ T
Sbjct: 749  TNTTSA-----PTTS---TTSAPITSTISAPTTSTTSTPQTSTISSPTTSTTPTPQTSTT 800

Query: 410  SSPNSFR*KACITS 451
            SSP +    A  TS
Sbjct: 801  SSPTTSTTSAPTTS 814


>BC126423-1|AAI26424.1|  210|Homo sapiens keratin associated protein
           4-7 protein.
          Length = 210

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -1

Query: 136 CSLLCRSFPCWTLRCGCHRQTCASTPNSPTAQKTTTCPNPV 14
           C   C   PC  LR  C R +C +T   PT    +TCP P+
Sbjct: 164 CCRPCCCRPCCCLRPVCGRVSCHTTCYRPTC-VISTCPRPL 203


>BC126421-1|AAI26422.1|  210|Homo sapiens keratin associated protein
           4-7 protein.
          Length = 210

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -1

Query: 136 CSLLCRSFPCWTLRCGCHRQTCASTPNSPTAQKTTTCPNPV 14
           C   C   PC  LR  C R +C +T   PT    +TCP P+
Sbjct: 164 CCRPCCCRPCCCLRPVCGRVSCHTTCYRPTC-VISTCPRPL 203


>AJ406945-1|CAC27584.1|  193|Homo sapiens keratin associated protein
           4.15 protein.
          Length = 193

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -1

Query: 136 CSLLCRSFPCWTLRCGCHRQTCASTPNSPTAQKTTTCPNPV 14
           C   C   PC  LR  C R +C +T   PT    +TCP P+
Sbjct: 147 CCRPCCCRPCCCLRPVCGRVSCHTTCYRPTC-VISTCPRPL 186


>AJ406939-1|CAC27578.1|  210|Homo sapiens keratin associated protein
           4.7 protein.
          Length = 210

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -1

Query: 136 CSLLCRSFPCWTLRCGCHRQTCASTPNSPTAQKTTTCPNPV 14
           C   C   PC  LR  C R +C +T   PT    +TCP P+
Sbjct: 164 CCRPCCCRPCCCLRPVCGRVSCHTTCYRPTC-VISTCPRPL 203


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,814,756
Number of Sequences: 237096
Number of extensions: 2066747
Number of successful extensions: 4666
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4659
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)